Acousto Aws3
root@ip-172-31-40-91:/home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole# history
1* apt-get install
2 apt-get install autoconf
3 pwd
4 cd ~
5 ls
6 cd /
7 ls
8 cd home
9 ls
10 cd ubuntu/
11 ls
12 cd acousto_pi/
13 ls -lar /aclib/
14 ls -laR /aclib/
15 history
16 ./configure --with-libs=/aclib/nice
17 nm /aclib/nice/libblas.so | grep "dgemm_"
18 nm /aclib/nice/libblas.so
19 ls -la /aclib/nice/libblas.so
20 ls -la /aclib/libopenblas.so.0
21 ls -la /usr/lib/openblas-base/libopenblas.so.0
22 nm /usr/lib/openblas-base/libopenblas.so.0
23 nm -D /usr/lib/openblas-base/libopenblas.so.0
24 nm -D /usr/lib/openblas-base/libopenblas.so.0 | grep "dgemm"
25 size /usr/lib/openblas-base/libopenblas.so.0
26 ls
27 vi configure.ac
28 cat configure.ac | grep "gfortran"
29 autoreconf -if
30 ./configure --with-libs=/aclib/nice
31 ls /aclib/nice/
32*
33 nm -D /usr/lib/openblas-base/libopenblas.so.0 | grep "zgegv_"
34 ls /usr/lib/openblas-base
35 ls -la /usr/lib/openblas-base
36 nm -D /usr/lib/openblas-base/libopenblas.a | grep "zgegv_"
37 find / -iname "liblapack*"
38 mv /aclib/nice/liblapack.so /aclib/nice/_liblapack.so
39 ln -s /etc/alternatives/liblapack.so.3gf /aclib/nice/liblapack.so
40 nm -D /aclib/nice/liblapack.so | grep "zgegv_"
41 mv /aclib/nice/libblas.so /aclib/nice/_libblas.so
42 find / -iname "libblas*"
43 ln -s /etc/alternatives/libblas.so /aclib/nice/libblas.so
44 ./configure --with-libs=/aclib/nice
45 sed -n '4500,4600p' ./configure
46 sed -n '4558,4568p' ./configure
47 vi ./configure.ac
48 autoreconf -if
49 vi ./configure.ac
50 autoreconf -if
51 ./configure --with-libs=/aclib/nice
52 make
53 wibble
54 apt-get install make
55 make
56 make install
57 acousto
58 cd doc/tutorials/Sphere_Monopole/
59 acousto -f sphere_source.cfg
60 ls -laR /aclib/
61 history
Last login: Thu Jan 23 17:00:37 on ttys001
ps-MacBook-Air:~ pi$ echo - - - - - thur 23 jan - - - - -
- - - - - thur 23 jan - - - - -
ps-MacBook-Air:~ pi$ history
2 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
3 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
4 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
5 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
6 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
7 autoreconf -f; clear; ./configure --enable-mpinew --enable-scalapack_new --with-libs=/usr/local/lib;
8 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;
9 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make
10 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
11 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
12 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
13 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
14 ls
15 ls -la
16 ls /usr/local/bin/acousto
17 cd /usr/local/bin/acousto
18 cd /usr/local/bin/
19 ls
20 cd /Users/pi/Downloads/acousto-1.6
21 ls
22 cd doc/tutorials/Sphere_Monopole/
23 ls
24 acousto
25 ls
26 acousto -f sphere_source.cfg
27 cd ..
28 pwd
29 cd ..
30 cd ..
31 ls
32 clear
33 autoreconf -f; clear; ./configure --enable-scalapack_new --enable-mpinew --with-libs=/usr/local/lib;make clean;make;make install
34 autoreconf -f; clear; ./configure --enable-scalapack_new --enable-mpinew
35 ls /usr/local/lib/
36 find / -iname "scalapack"
37 sudo find / -iname "scalapack"
38 ls -la /usr/local/opt/
39 ls -la /usr/local/Cellar/scalapack/
40 ls -la /usr/local/Cellar/scalapack/2.0.2/
41 ls -la /usr/local/Cellar/scalapack/2.0.2/lib/
42 ln -s /usr/local/Cellar/scalapack/2.0.2/lib/libscalapack.a /usr/local/lib/libscalapack.a
43 ls /usr/local/lib/
44 cd ~/Downloads/acousto-1.6
45 autoreconf -f; clear; ./configure --enable-scalapack_new --enable-mpinew
46 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
47 acousto -f ./doc/tutorials/Sphere_Monopole/sphere_source.cfg
48 cd doc/tutorials/Sphere_Monopole/
49 acousto -f sphere_source.cfg
50 cd ..
51 ls
52 cd ImpedSphere_PlaneWave/
53 ls
54 acousto -f sphere_pw.cfg
55 ln -s /usr/local/Cellar/openblas/0.2.8/lib/libopenblas.dylib /usr/local/lib/libopenblas.dylib
56 ls -la /usr/local/lib/
57 cd /usr/local/lib/
58 ls
59 mv libblas.a _libblas.a
60 mv liblapack.a _liblapack.a
61 ln -s libopenblas.dylib libblas.dylib
62 ln -s libopenblas.dylib liblapack.dylib
63 cd ~/Downloads/acousto-1.6
64 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
65 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
66 cd doc/tutorials/Sphere_Monopole/
67 ls
68 acousto -f sphere_source.cfg
69 ls -las
70 finder
71 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
72 cd ../../..
73 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
74 mkdir tmp_build
75 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
76 rmdir tmp_build/
77 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
78 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
79 autoreconf -f; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib
80 autoreconf -if; clear; ./configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
81 ls -lat
82 mkdir tmp_build
83 cd tmp_build/
84 autoreconf -if; clear; ../configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
85 cd ..
86 make distclean
87 cd tmp_build/
88 make distclean; autoreconf -if; clear; ../configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
89 ls
90 ls src/
91 cd ..
92 ls
93 pwd
94 make distclean
95 ls
96 mkdir m4
97 mv aclocal.m4 m4
98 cd m4
99 cat "foo" > bar
100 echo "foo" > bar
101 cat bar
102 echo "make sure this folder is not empty, as some related technologies have trouble with an empty folder e.g. git" > NOTES
103 rm bar
104 ls
105 cd ..
106 grep -r ROBODOC .
107 ls
108 ls ./m4
109 ls ./aux_build/
110 ls ./tmp_build/
111 cd tmp_build/
112 make distclean; autoreconf -if; clear; ../configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
113 acousto
114 make distclean
115 ls ..
116 rm ../aclocal.m4
117 ls ..
118 cd ..
119 make distclean
120 make distclean
121 cd tmp_build/
122 make distclean; autoreconf -if; clear; ../configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
123 cd .
124 cd ..
125 autoreconf -if
126 ls
127 autoreconf -if
128 autoreconf -if
129 autoreconf -if
130 autoreconf -if
131 cd tmp_build/
132 make distclean; autoreconf -if; clear; ../configure --enable-scalapack_new --with-libs=/usr/local/lib;make clean;make;make install
133 make distclean
134 make maintainerclean
135 ls
136 cd ..
137 ls
138 cd doc/tutorials/
139 cd Sphere_Monopole/
140 ls
141 cat acousto.chief.mesh
142 cat acousto.mics1.5.mesh
143 cat acousto.sources
144 cat sphere_source
145 cat sphere_source.cfg
146 mpirun -np 1 acousto -f sphere_source.cfg
147 cd ...
148 ls
149 cd ..
150 ls
151 cd Brass_FreqResponse/
152 ls
153 mpirun -np 1 acousto -f brass_fresp.cfg
154 cd ..
155 cd ..
156 cd ..
157 ls
158 cd doc/tutorials/Brass_FreqResponse/
159 ls
160 mpirun -np 1 acousto -f brass_fresp.cfg
161 history
162 cd Downloads/acousto-1.6
163 ls
164 ls m4/
165 cat m4/NOTES
166 ls aux_build/
167 cat src/Makefile.am
168 cat Makefile.am
169 cd Downloads/acousto-1.6/doc/tutorials/Brass_FreqResponse/
170 ls
171 ls -la
172 cat acousto.custombc.func.dat
173 cat acousto.custombc.gamma.dat
174 cat acousto.custombc.gvec.dat
175 cat acousto.custombc.lambda.dat
176 ls .*
177 pwd
178 ls -la
179 $PATH
180 python --version
181 which python
182 brew install python
183 python --version
184 which python
185 sudo find / -iname "python"
186 ls -la /usr/bin/python
187 ls -la /usr/local/bin/python
188 which python
189 ls -la /usr/local/share/python
190 pip install numpy
191 pip install scipy
192 python
193 pip install matplotlib
194 pip uninstall numpy
195 pip uninstall scipy
196 brew install numpy --with-openblas
197 brew tap homebrew/science
198 brew tap samueljohn/python
199 brew update && brew upgrade
200 brew install openblas
201 brew install numpy --with-openblas
202 brew install numpy --with-openblas
203 brew install scipy --with-openblas
204 cd Downloads/acousto-1.6
205 ls -lat
206 pip install pandas nltk matplotlib sympy q
207 ln -s ~/Dev/Processing ~/Documents/Processing
208 ln -s ~/Dev/HRTF/acousto-1.6/blender/io_mesh_acousto_pi /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/io_mesh_acousto_pi
209 homebrew --hlep
210 homebrew --help
211 homebrew
212 brew --help
213 brew info python
214 cd Dev
215 ls
216 mkdir BlenderAddons
217 mkdir /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
218 pwd
219 ln -s /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi blenderAddons
220 ls -la
221 ls BlenderAddons/
222 ls BlenderAddons/pi/
223 ln -s /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi BlenderAddons
224 ln -s /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi blenderAddons
225 ls -la
226 cd blenderAddons
227 pwd
228 cd ..
229 ls
230 rm blenderAddons
231 ls -la
232 rmdir /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
233 mkdir blenderAddons
234 ln -s blenderAddons/ /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
235 ls -la
236 cd blenderAddons/
237 ls
238 touch foo.py
239 touch __init__.py
240 blender
241 /Applications/blender.app/Contents/MacOS/blender
242 /Applications/blender.app/Contents/MacOS/blender
243 ls ~/Dev/blenderAddons/pointcloud.py
244 history
245 ln -s /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi/
246 mkdir /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
247 rmdir /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
248 mkdir /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi ~/Dev/blenderAddons/
249 cd /Applications/blender.app/Contents/MacOS/2.69/scripts/addons/pi
250 ln -s ~/Dev/blenderAddons
251 ls
252 cd ..
253 mv pi _pi
254 ln -s ~/Dev/blenderAddons ./pi
255 cd pi
256 touch foo
257 cd ~/Dev/blenderAddons/
258 ls
259 ls -la
260 ls
261 ls *acou*
262 ls -la
263 mkdir tst
264 cd tst
265 touch A
266 ls
267 mkdir fldr
268 cd fldr
269 cd ..
270 echo "hello" > A
271 cat A
272 cd fldr
273 ls
274 ln -s ../A
275 ls -la
276 cd ..
277 pwd
278 cd ..
279 rmdir tst
280 rm -rf tst
281 ls
282 cd Dev/
283 ln -s ./HRTF/acousto-1.6 ac
284 ls -la
285 cd ac
286 ls
287 python freq2imp.py
288 ls
289 chmod a+x freq2imp.py
290 ./freq2imp.py foo bar
291 ./freq2imp.py foo bar
292 cd doc/tutorials/Sphere_Monopole/
293 ls
294 ls -la
295 cd pro-ch0-pc1-gmr-2014-01-17/
296 ls
297 cat pro-ch0-pc1-gmr-mics.wrl
298 cat pro-ch0-pc1-gmr-mics-171.5000Hz.out
299 pwd
300 cat pro-ch0-pc1-gmr-mics-171.5000Hz.out > ../../../../tst.txt
301 cd ../../../..
302 pwd
303 ls
304 ./freq2imp.py tst.txt
305 ./freq2imp.py tst.txt
306 ./freq2imp.py tst.txt
307 ./freq2imp.py tst.txt
308 ./freq2imp.py tst.txt
309 ./freq2imp.py tst.txt
310 ./freq2imp.py tst.txt
311 ./freq2imp.py tst.txt
312 ./freq2imp.py tst.txt
313 ./freq2imp.py tst.txt
314 ./freq2imp.py tst.txt
315 python
316 ./freq2imp.py tst.txt tst_out.txt
317 ./freq2imp.py tst.txt tst_out.txt
318 ./freq2imp.py tst.txt tst_out.txt
319 ./freq2imp.py tst.txt tst_out.txt
320 ./freq2imp.py tst.txt tst_out.txt
321 ./freq2imp.py tst.txt tst_out.txt
322 ./freq2imp.py tst.txt tst_out.txt
323 cat tst_out.txt
324 cat tst_out.txt
325 cat tst_out.txt
326 cat tst_out.txt
327 cat tst_out.txt
328 ./freq2imp.py tst.txt tst_out.txt
329 ./freq2imp.py tst.txt tst_out.txt
330 ./freq2imp.py tst.txt tst_out.txt
331 ./freq2imp.py tst.txt tst_out.txt
332 ./freq2imp.py tst.txt tst_out.txt
333 ./freq2imp.py tst.txt tst_out.txt
334 ./freq2imp.py tst.txt tst_out.txt
335 ./freq2imp.py tst.txt tst_out.txt
336 ./freq2imp.py tst.txt tst_out.txt
337 ./freq2imp.py tst.txt tst_out.txt
338 ./freq2imp.py tst.txt tst_out.txt
339 ./freq2imp.py tst.txt tst_out.txt
340 ./freq2imp.py tst.txt tst_out.txt
341 ./freq2imp.py tst.txt tst_out.txt
342 ./freq2imp.py tst.txt tst_out.txt
343 ./freq2imp.py tst.txt tst_out.txt
344 ./freq2imp.py tst.txt tst_out.txt
345 ./freq2imp.py tst.txt tst_out.txt
346 ./freq2imp.py tst.txt tst_out.txt
347 ./freq2imp.py tst.txt tst_out.txt
348 ./freq2imp.py tst.txt tst_out.txt
349 ./freq2imp.py tst.txt tst_out.txt
350 python
351 ./freq2imp.py tst.txt tst_out.txt
352 ./freq2imp.py tst.txt tst_out.txt
353 ./freq2imp.py tst.txt tst_out.txt
354 ./freq2imp.py tst.txt tst_out.txt
355 ./freq2imp.py tst.txt tst_out.txt
356 ./freq2imp.py tst.txt tst_out.txt
357 ./freq2imp.py tst.txt tst_out.txt
358 ./freq2imp.py tst.txt tst_out.txt
359 python
360 ./freq2imp.py tst.txt tst_out.txt
361 ./freq2imp.py tst.txt tst_out.txt
362 python
363 ./freq2imp.py tst.txt tst_out.txt
364 ./freq2imp.py tst.txt tst_out.txt
365 ./freq2imp.py tst.txt tst_out.txt
366 ./freq2imp.py tst.txt tst_out.txt
367 ./freq2imp.py tst.txt tst_out.txt
368 ./freq2imp.py tst.txt tst_out.txt
369 ./freq2imp.py tst.txt tst_out.txt
370 ./freq2imp.py tst.txt tst_out.txt
371 ./freq2imp.py tst.txt tst_out.txt
372 ./freq2imp.py tst.txt tst_out.txt
373 ./freq2imp.py tst.txt tst_out.txt
374 ./freq2imp.py tst.txt tst_out.txt
375 ./freq2imp.py tst.txt tst_out.txt
376 ./freq2imp.py tst.txt tst_out.txt
377 ./freq2imp.py tst.txt tst_out.txt
378 ./freq2imp.py tst.txt tst_out.txt
379 ./freq2imp.py tst.txt tst_out.txt
380 ./freq2imp.py tst.txt tst_out.txt
381 ./freq2imp.py tst.txt tst_out.txt
382 ./freq2imp.py tst.txt tst_out.txt
383 ./freq2imp.py tst.txt tst_out.txt
384 ./freq2imp.py tst.txt tst_out.txt
385 ./freq2imp.py tst.txt tst_out.txt
386 python
387 python
388 ./freq2imp.py tst.txt tst_out.txt
389 ./freq2imp.py tst.txt tst_out.txt
390 ./freq2imp.py tst.txt tst_out.txt
391 ./freq2imp.py tst.txt tst_out.txt
392 ./freq2imp.py tst.txt tst_out.txt
393 ls -lat
394 sudo find / -iname "*vlc*
395 123
396 sudo find / -iname "*vlc*"
397 sudo find / -iname "VLC.app"
398 cd Dev
399 pwd
400 cd ac
401 cd ../../Desktop
402 cd AcoustoExport/
403 ls
404 acousto
405 acousto -f pi.cfg
406 acousto -f pi.cfg
407 clear
408 acousto -f pi.cfg
409 mpirun -np1 gdb acousto
410 mpirun -np 1 gdb acousto
411 xcode-select --install
412 xcode-select --install
413 ping google.com
414 xcode-select --install
415 gdb
416 sudo find / -iname "*gdb*"
417 ls -la /usr/local/share/
418 xcode-select --install
419 xcode-select --install
420 xcode-select --install
421 xcode-select --install
422 /usr/bin/xcodebuild -version
423 mpirun -np 1 lldb acousto
424 xcode-select -p
425 gcc
426 which gcc
427 gcc -version
428 gcc -version
429 gcc --version
430 gcc --version
431 gcc --version
432 which gcc
433 ls -la /usr/bin/
434 cd Desktop/
435 cd A
436 cd AcoustoExport
437 ls
438 mpirun -np 1 acousto -f pi.cfg
439 cd ~/ac
440 cd ~/Dev/ac
441 cd doc/tutorials/Brass_FreqResponse/
442 ls
443 cat brass_fresp.cfg
444 mpirun -np 1 acousto -f brass_fresp.cfg
445 mpirun -np 1 acousto -f brass_fresp.cfg
446 ssh
447 cd Downloads/awscli-bundle
448 ls
449 cd ..
450 sudo ./awscli-bundle/install -i /usr/local/aws -b /usr/local/bin/aws
451 aws --version
452 ec2-get-console-output i-4b339a42
453 pwd
454 ls *.pem
455 chmod 400 EC2_free_keypair.pem
456 ssh -i EC2_free_keypair.pem ubuntu@ec2-54-213-58-111.us-west-2.compute.amazonaws.com
457 pwd
458 lw
459 ls
460 ssh -i ./EC2_free_keypair.pem ubuntu@ec2-54-213-58-111.us-west-2.compute.amazonaws.com
461 ssh -v -i ./EC2_free_keypair.pem ubuntu@ec2-54-213-58-111.us-west-2.compute.amazonaws.com
462 ssh -v -i ./EC2_free_keypair.pem ec2-user@ec2-54-213-58-111.us-west-2.compute.amazonaws.com
463 cd Downloads/
464 ssh -v -i ./EC2_free_keypair.pem ec2-user@ec2-54-213-58-111.us-west-2.compute.amazonaws.com
465 ssh -v -i ./EC2_free_keypair.pem ec2-user@ec2-54-201-110-232.us-west-2.compute.amazonaws.com
466 ssh -v -i ./EC2_free_keypair.pem sudo apt-get install gfortran
467 ssh -v -i ./EC2_free_keypair.pem ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com
468 pwd
469 cd ../Desktop/
470 scp -r acousto-1.6 ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com:/home/ubuntu
471 scp -r -i ~/Downloads/EC2_free_keypair.pem acousto-1.6 ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com:/home/ubuntu
472 history
473 xxx_scp -r -i ~/Downloads/EC2_free_keypair.pem acousto-1.6 ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com:/home/ubuntu
474 history
475 ssh -v -i ./EC2_free_keypair.pem ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com
476 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com
477 history
478 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-200-125-171.us-west-2.compute.amazonaws.com
479 ssh -v -i ~/Downloads/EC2_free_keypair.pem ec2-54-201-194-99.us-west-2.compute.amazonaws.com
480 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
481 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
482 scp -r -i ~/Downloads/EC2_free_keypair.pem ~/Desktop/acousto-1.6 ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com:/home/ubuntu
483 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
484 echo "ServerAliveInterval 1800" >> ~/.ssh/config
485 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
486 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
487 scp -r -i ~/Downloads/EC2_free_keypair.pem ~/Dev/HRTF/acousto_pi ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com:/home/ubuntu
488 history
489 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
490 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
491 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
492 pwd
493 ls
494 ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-201-194-99.us-west-2.compute.amazonaws.com
495 cd Dev
496 ls
497 pwd
498 cd HRTF/acousto_pi/
499 vi configure.ac
500 echo - - - - - thur 23 jan - - - - -
501 history
ps-MacBook-Air:~ pi$ cat ~/.ssh/config
ServerAliveInterval 1800
ps-MacBook-Air:~ pi$ echo "ServerAliveInterval 60" >> ~/.ssh/config
ps-MacBook-Air:~ pi$ echo "ServerAliveInterval 60" > ~/.ssh/config
ps-MacBook-Air:~ pi$ cat ~/.ssh/config
ServerAliveInterval 60
ps-MacBook-Air:~ pi$ ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-200-77-138.us-west-2.compute.amazonaws.com
OpenSSH_6.2p2, OSSLShim 0.9.8r 8 Dec 2011
debug1: Reading configuration data /Users/pi/.ssh/config
debug1: Reading configuration data /etc/ssh_config
debug1: /etc/ssh_config line 20: Applying options for *
debug1: Connecting to ec2-54-200-77-138.us-west-2.compute.amazonaws.com [54.200.77.138] port 22.
debug1: Connection established.
debug1: identity file /Users/pi/Downloads/EC2_free_keypair.pem type -1
debug1: identity file /Users/pi/Downloads/EC2_free_keypair.pem-cert type -1
debug1: Enabling compatibility mode for protocol 2.0
debug1: Local version string SSH-2.0-OpenSSH_6.2
debug1: Remote protocol version 2.0, remote software version OpenSSH_5.9p1 Debian-5ubuntu1.1
debug1: match: OpenSSH_5.9p1 Debian-5ubuntu1.1 pat OpenSSH_5*
debug1: SSH2_MSG_KEXINIT sent
debug1: SSH2_MSG_KEXINIT received
debug1: kex: server->client aes128-ctr hmac-md5 none
debug1: kex: client->server aes128-ctr hmac-md5 none
debug1: SSH2_MSG_KEX_DH_GEX_REQUEST(1024<1024<8192) sent
debug1: expecting SSH2_MSG_KEX_DH_GEX_GROUP
debug1: SSH2_MSG_KEX_DH_GEX_INIT sent
debug1: expecting SSH2_MSG_KEX_DH_GEX_REPLY
debug1: Server host key: RSA b6:31:33:a2:15:e8:64:e7:ff:62:26:b3:e3:99:1b:06
The authenticity of host 'ec2-54-200-77-138.us-west-2.compute.amazonaws.com (54.200.77.138)' can't be established.
RSA key fingerprint is b6:31:33:a2:15:e8:64:e7:ff:62:26:b3:e3:99:1b:06.
Are you sure you want to continue connecting (yes/no)? yes
Warning: Permanently added 'ec2-54-200-77-138.us-west-2.compute.amazonaws.com,54.200.77.138' (RSA) to the list of known hosts.
debug1: ssh_rsa_verify: signature correct
debug1: SSH2_MSG_NEWKEYS sent
debug1: expecting SSH2_MSG_NEWKEYS
debug1: SSH2_MSG_NEWKEYS received
debug1: Roaming not allowed by server
debug1: SSH2_MSG_SERVICE_REQUEST sent
debug1: SSH2_MSG_SERVICE_ACCEPT received
debug1: Authentications that can continue: publickey
debug1: Next authentication method: publickey
debug1: Trying private key: /Users/pi/Downloads/EC2_free_keypair.pem
debug1: read PEM private key done: type RSA
debug1: Authentication succeeded (publickey).
Authenticated to ec2-54-200-77-138.us-west-2.compute.amazonaws.com ([54.200.77.138]:22).
debug1: channel 0: new [client-session]
debug1: Requesting no-more-sessions@openssh.com
debug1: Entering interactive session.
debug1: Sending environment.
debug1: Sending env LANG = en_GB.UTF-8
Welcome to Ubuntu 12.04.3 LTS (GNU/Linux 3.2.0-54-virtual x86_64)
* Documentation: https://help.ubuntu.com/
System information as of Thu Jan 23 22:43:46 UTC 2014
System load: 0.08 Processes: 58
Usage of /: 11.1% of 7.87GB Users logged in: 0
Memory usage: 6% IP address for eth0: 172.31.40.91
Swap usage: 0%
Graph this data and manage this system at https://landscape.canonical.com/
Get cloud support with Ubuntu Advantage Cloud Guest:
http://www.ubuntu.com/business/services/cloud
Use Juju to deploy your cloud instances and workloads:
https://juju.ubuntu.com/#cloud-precise
0 packages can be updated.
0 updates are security updates.
The programs included with the Ubuntu system are free software;
the exact distribution terms for each program are described in the
individual files in /usr/share/doc/*/copyright.
Ubuntu comes with ABSOLUTELY NO WARRANTY, to the extent permitted by
applicable law.
To run a command as administrator (user "root"), use "sudo <command>".
See "man sudo_root" for details.
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$ apt-get update
E: Could not open lock file /var/lib/apt/lists/lock - open (13: Permission denied)
E: Unable to lock directory /var/lib/apt/lists/
E: Could not open lock file /var/lib/dpkg/lock - open (13: Permission denied)
E: Unable to lock the administration directory (/var/lib/dpkg/), are you root?
ubuntu@ip-172-31-40-91:~$ sudo apt-get update
Get:1 http://us-west-2.ec2.archive.ubuntu.com precise Release.gpg [198 B]
Get:2 http://us-west-2.ec2.archive.ubuntu.com precise-updates Release.gpg [198 B]
Get:3 http://us-west-2.ec2.archive.ubuntu.com precise Release [49.6 kB]
Get:4 http://us-west-2.ec2.archive.ubuntu.com precise-updates Release [49.6 kB]
Get:5 http://us-west-2.ec2.archive.ubuntu.com precise/main Sources [934 kB]
Get:6 http://us-west-2.ec2.archive.ubuntu.com precise/universe Sources [5,019 kB]
Get:7 http://security.ubuntu.com precise-security Release.gpg [198 B]
Get:8 http://security.ubuntu.com precise-security Release [49.6 kB]
Get:9 http://us-west-2.ec2.archive.ubuntu.com precise/main amd64 Packages [1,273 kB]
Get:10 http://us-west-2.ec2.archive.ubuntu.com precise/universe amd64 Packages [4,786 kB]
Get:11 http://security.ubuntu.com precise-security/main Sources [96.7 kB]
Get:12 http://us-west-2.ec2.archive.ubuntu.com precise/main i386 Packages [1,274 kB]
Get:13 http://us-west-2.ec2.archive.ubuntu.com precise/universe i386 Packages [4,796 kB]
Get:14 http://security.ubuntu.com precise-security/universe Sources [30.5 kB]
Get:15 http://security.ubuntu.com precise-security/main amd64 Packages [357 kB]
Get:16 http://us-west-2.ec2.archive.ubuntu.com precise/main TranslationIndex [3,706 B]
Get:17 http://us-west-2.ec2.archive.ubuntu.com precise/universe TranslationIndex [2,922 B]
Get:18 http://us-west-2.ec2.archive.ubuntu.com precise-updates/main Sources [448 kB]
Get:19 http://us-west-2.ec2.archive.ubuntu.com precise-updates/universe Sources [101 kB]
Get:20 http://us-west-2.ec2.archive.ubuntu.com precise-updates/main amd64 Packages [744 kB]
Get:21 http://us-west-2.ec2.archive.ubuntu.com precise-updates/universe amd64 Packages [231 kB]
Get:22 http://us-west-2.ec2.archive.ubuntu.com precise-updates/main i386 Packages [768 kB]
Get:23 http://us-west-2.ec2.archive.ubuntu.com precise-updates/universe i386 Packages [236 kB]
Get:24 http://us-west-2.ec2.archive.ubuntu.com precise-updates/main TranslationIndex [3,564 B]
Get:25 http://us-west-2.ec2.archive.ubuntu.com precise-updates/universe TranslationIndex [2,850 B]
Get:26 http://us-west-2.ec2.archive.ubuntu.com precise/main Translation-en [726 kB]
Get:27 http://us-west-2.ec2.archive.ubuntu.com precise/universe Translation-en [3,341 kB]
Get:28 http://security.ubuntu.com precise-security/universe amd64 Packages [90.1 kB]
Hit http://us-west-2.ec2.archive.ubuntu.com precise-updates/main Translation-en
Hit http://us-west-2.ec2.archive.ubuntu.com precise-updates/universe Translation-en
Get:29 http://security.ubuntu.com precise-security/main i386 Packages [377 kB]
Get:30 http://security.ubuntu.com precise-security/universe i386 Packages [94.5 kB]
Get:31 http://security.ubuntu.com precise-security/main TranslationIndex [74 B]
Get:32 http://security.ubuntu.com precise-security/universe TranslationIndex [73 B]
Get:33 http://security.ubuntu.com precise-security/main Translation-en [168 kB]
Get:34 http://security.ubuntu.com precise-security/universe Translation-en [56.1 kB]
Fetched 26.1 MB in 19s (1,372 kB/s)
Reading package lists... Done
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$ sudo apt-get install gfortran
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
binutils cpp cpp-4.6 gcc gcc-4.6 gfortran-4.6 libc-bin libc-dev-bin libc6 libc6-dev libgfortran3 libgomp1 libmpc2 libmpfr4 libquadmath0
linux-libc-dev manpages-dev
Suggested packages:
binutils-doc cpp-doc gcc-4.6-locales gcc-multilib make autoconf automake1.9 libtool flex bison gdb gcc-doc gcc-4.6-multilib libmudflap0-4.6-dev
gcc-4.6-doc libgcc1-dbg libgomp1-dbg libquadmath0-dbg libmudflap0-dbg binutils-gold gfortran-multilib gfortran-doc gfortran-4.6-multilib
gfortran-4.6-doc libgfortran3-dbg glibc-doc
The following NEW packages will be installed:
binutils cpp cpp-4.6 gcc gcc-4.6 gfortran gfortran-4.6 libc-dev-bin libc6-dev libgfortran3 libgomp1 libmpc2 libmpfr4 libquadmath0
linux-libc-dev manpages-dev
The following packages will be upgraded:
libc-bin libc6
2 upgraded, 16 newly installed, 0 to remove and 61 not upgraded.
Need to get 32.8 MB of archives.
After this operation, 71.4 MB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main libc-bin amd64 2.15-0ubuntu10.5 [1,182 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main libc6 amd64 2.15-0ubuntu10.5 [4,654 kB]
Get:3 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libquadmath0 amd64 4.6.3-1ubuntu5 [126 kB]
Get:4 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libgfortran3 amd64 4.6.3-1ubuntu5 [357 kB]
Get:5 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libgomp1 amd64 4.6.3-1ubuntu5 [25.5 kB]
Get:6 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libmpfr4 amd64 3.1.0-3ubuntu2 [201 kB]
Get:7 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libmpc2 amd64 0.9-4 [39.5 kB]
Get:8 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main binutils amd64 2.22-6ubuntu1.1 [2,638 kB]
Get:9 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main cpp-4.6 amd64 4.6.3-1ubuntu5 [4,836 kB]
Get:10 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main cpp amd64 4:4.6.3-1ubuntu5 [27.6 kB]
Get:11 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main gcc-4.6 amd64 4.6.3-1ubuntu5 [7,572 kB]
Get:12 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main gcc amd64 4:4.6.3-1ubuntu5 [5,114 B]
Get:13 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main libc-dev-bin amd64 2.15-0ubuntu10.5 [83.9 kB]
Get:14 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main linux-libc-dev amd64 3.2.0-58.88 [863 kB]
Get:15 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main libc6-dev amd64 2.15-0ubuntu10.5 [2,941 kB]
Get:16 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main gfortran-4.6 amd64 4.6.3-1ubuntu5 [5,579 kB]
Get:17 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main gfortran amd64 4:4.6.3-1ubuntu5 [1,206 B]
Get:18 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main manpages-dev all 3.35-0.1ubuntu1 [1,671 kB]
Fetched 32.8 MB in 2s (14.7 MB/s)
Preconfiguring packages ...
(Reading database ... 47490 files and directories currently installed.)
Preparing to replace libc-bin 2.15-0ubuntu10.4 (using .../libc-bin_2.15-0ubuntu10.5_amd64.deb) ...
Unpacking replacement libc-bin ...
Processing triggers for initramfs-tools ...
update-initramfs: Generating /boot/initrd.img-3.2.0-54-virtual
Processing triggers for man-db ...
Setting up libc-bin (2.15-0ubuntu10.5) ...
(Reading database ... 47490 files and directories currently installed.)
Preparing to replace libc6 2.15-0ubuntu10.4 (using .../libc6_2.15-0ubuntu10.5_amd64.deb) ...
Unpacking replacement libc6 ...
Setting up libc6 (2.15-0ubuntu10.5) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
Selecting previously unselected package libquadmath0.
(Reading database ... 47490 files and directories currently installed.)
Unpacking libquadmath0 (from .../libquadmath0_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package libgfortran3.
Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package libgomp1.
Unpacking libgomp1 (from .../libgomp1_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package libmpfr4.
Unpacking libmpfr4 (from .../libmpfr4_3.1.0-3ubuntu2_amd64.deb) ...
Selecting previously unselected package libmpc2.
Unpacking libmpc2 (from .../libmpc2_0.9-4_amd64.deb) ...
Selecting previously unselected package binutils.
Unpacking binutils (from .../binutils_2.22-6ubuntu1.1_amd64.deb) ...
Selecting previously unselected package cpp-4.6.
Unpacking cpp-4.6 (from .../cpp-4.6_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package cpp.
Unpacking cpp (from .../cpp_4%3a4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package gcc-4.6.
Unpacking gcc-4.6 (from .../gcc-4.6_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package gcc.
Unpacking gcc (from .../gcc_4%3a4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package libc-dev-bin.
Unpacking libc-dev-bin (from .../libc-dev-bin_2.15-0ubuntu10.5_amd64.deb) ...
Selecting previously unselected package linux-libc-dev.
Unpacking linux-libc-dev (from .../linux-libc-dev_3.2.0-58.88_amd64.deb) ...
Selecting previously unselected package libc6-dev.
Unpacking libc6-dev (from .../libc6-dev_2.15-0ubuntu10.5_amd64.deb) ...
Selecting previously unselected package gfortran-4.6.
Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package gfortran.
Unpacking gfortran (from .../gfortran_4%3a4.6.3-1ubuntu5_amd64.deb) ...
Selecting previously unselected package manpages-dev.
Unpacking manpages-dev (from .../manpages-dev_3.35-0.1ubuntu1_all.deb) ...
Processing triggers for man-db ...
Setting up libquadmath0 (4.6.3-1ubuntu5) ...
Setting up libgfortran3 (4.6.3-1ubuntu5) ...
Setting up libgomp1 (4.6.3-1ubuntu5) ...
Setting up libmpfr4 (3.1.0-3ubuntu2) ...
Setting up libmpc2 (0.9-4) ...
Setting up binutils (2.22-6ubuntu1.1) ...
Setting up cpp-4.6 (4.6.3-1ubuntu5) ...
Setting up cpp (4:4.6.3-1ubuntu5) ...
Setting up gcc-4.6 (4.6.3-1ubuntu5) ...
Setting up gcc (4:4.6.3-1ubuntu5) ...
Setting up libc-dev-bin (2.15-0ubuntu10.5) ...
Setting up linux-libc-dev (3.2.0-58.88) ...
Setting up libc6-dev (2.15-0ubuntu10.5) ...
Setting up gfortran-4.6 (4.6.3-1ubuntu5) ...
Setting up gfortran (4:4.6.3-1ubuntu5) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up manpages-dev (3.35-0.1ubuntu1) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libconfig8
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following NEW packages will be installed:
libconfig8
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 21.5 kB of archives.
After this operation, 111 kB of additional disk space will be used.
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libconfig8 amd64 1.3.2-2ubuntu2 [21.5 kB]
Fetched 21.5 kB in 0s (443 kB/s)
Selecting previously unselected package libconfig8.
(Reading database ... 50840 files and directories currently installed.)
Unpacking libconfig8 (from .../libconfig8_1.3.2-2ubuntu2_amd64.deb) ...
Setting up libconfig8 (1.3.2-2ubuntu2) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libconfig8-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
pkg-config
The following NEW packages will be installed:
libconfig8-dev pkg-config
0 upgraded, 2 newly installed, 0 to remove and 61 not upgraded.
Need to get 358 kB of archives.
After this operation, 623 kB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main pkg-config amd64 0.26-1ubuntu1 [40.9 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libconfig8-dev amd64 1.3.2-2ubuntu2 [317 kB]
Fetched 358 kB in 0s (2,237 kB/s)
Selecting previously unselected package pkg-config.
(Reading database ... 50847 files and directories currently installed.)
Unpacking pkg-config (from .../pkg-config_0.26-1ubuntu1_amd64.deb) ...
Selecting previously unselected package libconfig8-dev.
Unpacking libconfig8-dev (from .../libconfig8-dev_1.3.2-2ubuntu2_amd64.deb) ...
Processing triggers for man-db ...
Processing triggers for install-info ...
Setting up pkg-config (0.26-1ubuntu1) ...
Setting up libconfig8-dev (1.3.2-2ubuntu2) ...
ubuntu@ip-172-31-40-91:~$ sudo apt-get install openmpi-bin
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
blcr-util libcr0 libibverbs1 libnuma1 libopenmpi1.3 libtorque2 openmpi-checkpoint openmpi-common
Suggested packages:
blcr-dkms
The following NEW packages will be installed:
blcr-util libcr0 libibverbs1 libnuma1 libopenmpi1.3 libtorque2 openmpi-bin openmpi-checkpoint openmpi-common
0 upgraded, 9 newly installed, 0 to remove and 61 not upgraded.
Need to get 1,823 kB of archives.
After this operation, 5,453 kB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/universe libcr0 amd64 0.8.2-15ubuntu2.1 [22.6 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/universe blcr-util amd64 0.8.2-15ubuntu2.1 [28.5 kB]
Get:3 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libnuma1 amd64 2.0.8~rc3-1 [23.1 kB]
Get:4 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libtorque2 amd64 2.4.16+dfsg-1build1 [91.6 kB]
Get:5 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libibverbs1 amd64 1.1.5-1ubuntu1 [27.3 kB]
Get:6 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libopenmpi1.3 amd64 1.4.3-2.1ubuntu3 [1,350 kB]
Get:7 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe openmpi-common all 1.4.3-2.1ubuntu3 [84.4 kB]
Get:8 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe openmpi-bin amd64 1.4.3-2.1ubuntu3 [156 kB]
Get:9 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe openmpi-checkpoint amd64 1.4.3-2.1ubuntu3 [39.9 kB]
Fetched 1,823 kB in 0s (4,288 kB/s)
Selecting previously unselected package libcr0.
(Reading database ... 50875 files and directories currently installed.)
Unpacking libcr0 (from .../libcr0_0.8.2-15ubuntu2.1_amd64.deb) ...
Selecting previously unselected package blcr-util.
Unpacking blcr-util (from .../blcr-util_0.8.2-15ubuntu2.1_amd64.deb) ...
Selecting previously unselected package libnuma1.
Unpacking libnuma1 (from .../libnuma1_2.0.8~rc3-1_amd64.deb) ...
Selecting previously unselected package libtorque2.
Unpacking libtorque2 (from .../libtorque2_2.4.16+dfsg-1build1_amd64.deb) ...
Selecting previously unselected package libibverbs1.
Unpacking libibverbs1 (from .../libibverbs1_1.1.5-1ubuntu1_amd64.deb) ...
Selecting previously unselected package libopenmpi1.3.
Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.3-2.1ubuntu3_amd64.deb) ...
Selecting previously unselected package openmpi-common.
Unpacking openmpi-common (from .../openmpi-common_1.4.3-2.1ubuntu3_all.deb) ...
Selecting previously unselected package openmpi-bin.
Unpacking openmpi-bin (from .../openmpi-bin_1.4.3-2.1ubuntu3_amd64.deb) ...
Selecting previously unselected package openmpi-checkpoint.
Unpacking openmpi-checkpoint (from .../openmpi-checkpoint_1.4.3-2.1ubuntu3_amd64.deb) ...
Processing triggers for man-db ...
Setting up libcr0 (0.8.2-15ubuntu2.1) ...
Setting up blcr-util (0.8.2-15ubuntu2.1) ...
Setting up libnuma1 (2.0.8~rc3-1) ...
Setting up libtorque2 (2.4.16+dfsg-1build1) ...
Setting up libibverbs1 (1.1.5-1ubuntu1) ...
Setting up libopenmpi1.3 (1.4.3-2.1ubuntu3) ...
Setting up openmpi-common (1.4.3-2.1ubuntu3) ...
Setting up openmpi-bin (1.4.3-2.1ubuntu3) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode.
Setting up openmpi-checkpoint (1.4.3-2.1ubuntu3) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libblacs-mpi1
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
mpi-default-bin
The following NEW packages will be installed:
libblacs-mpi1 mpi-default-bin
0 upgraded, 2 newly installed, 0 to remove and 61 not upgraded.
Need to get 68.0 kB of archives.
After this operation, 262 kB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe mpi-default-bin amd64 1.0.1 [3,042 B]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libblacs-mpi1 amd64 1.1-31ubuntu1 [64.9 kB]
Fetched 68.0 kB in 0s (633 kB/s)
Selecting previously unselected package mpi-default-bin.
(Reading database ... 51162 files and directories currently installed.)
Unpacking mpi-default-bin (from .../mpi-default-bin_1.0.1_amd64.deb) ...
Selecting previously unselected package libblacs-mpi1.
Unpacking libblacs-mpi1 (from .../libblacs-mpi1_1.1-31ubuntu1_amd64.deb) ...
Setting up mpi-default-bin (1.0.1) ...
Setting up libblacs-mpi1 (1.1-31ubuntu1) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libblacs-mpi1-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
E: Unable to locate package libblacs-mpi1-dev
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libblacs-mpi-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
libibverbs-dev libopenmpi-dev mpi-default-dev
The following NEW packages will be installed:
libblacs-mpi-dev libibverbs-dev libopenmpi-dev mpi-default-dev
0 upgraded, 4 newly installed, 0 to remove and 61 not upgraded.
Need to get 2,871 kB of archives.
After this operation, 14.7 MB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libibverbs-dev amd64 1.1.5-1ubuntu1 [76.1 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libopenmpi-dev amd64 1.4.3-2.1ubuntu3 [2,718 kB]
Get:3 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe mpi-default-dev amd64 1.0.1 [3,648 B]
Get:4 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libblacs-mpi-dev amd64 1.1-31ubuntu1 [72.7 kB]
Fetched 2,871 kB in 0s (5,560 kB/s)
Selecting previously unselected package libibverbs-dev.
(Reading database ... 51175 files and directories currently installed.)
Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.5-1ubuntu1_amd64.deb) ...
Selecting previously unselected package libopenmpi-dev.
Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.3-2.1ubuntu3_amd64.deb) ...
Selecting previously unselected package mpi-default-dev.
Unpacking mpi-default-dev (from .../mpi-default-dev_1.0.1_amd64.deb) ...
Selecting previously unselected package libblacs-mpi-dev.
Unpacking libblacs-mpi-dev (from .../libblacs-mpi-dev_1.1-31ubuntu1_amd64.deb) ...
Processing triggers for man-db ...
Setting up libibverbs-dev (1.1.5-1ubuntu1) ...
Setting up libopenmpi-dev (1.4.3-2.1ubuntu3) ...
update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode.
Setting up mpi-default-dev (1.0.1) ...
Setting up libblacs-mpi-dev (1.1-31ubuntu1) ...
ubuntu@ip-172-31-40-91:~$ sudo apt-cache search openblas
libopenblas-base - Optimized BLAS (linear algebra) library based on GotoBLAS2
libopenblas-dev - Optimized BLAS (linear algebra) library based on GotoBLAS2
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libopenblas-base
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
liblapack3gf
The following NEW packages will be installed:
libopenblas-base
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 3,625 kB of archives.
After this operation, 19.6 MB of additional disk space will be used.
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libopenblas-base amd64 0.1alpha2.2-3 [3,625 kB]
Fetched 3,625 kB in 0s (11.8 MB/s)
Selecting previously unselected package libopenblas-base.
(Reading database ... 51804 files and directories currently installed.)
Unpacking libopenblas-base (from .../libopenblas-base_0.1alpha2.2-3_amd64.deb) ...
Setting up libopenblas-base (0.1alpha2.2-3) ...
update-alternatives: using /usr/lib/openblas-base/libopenblas.so.0 to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libopenblas-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
liblapack-dev
The following NEW packages will be installed:
libopenblas-dev
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 4,188 kB of archives.
After this operation, 31.1 MB of additional disk space will be used.
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libopenblas-dev amd64 0.1alpha2.2-3 [4,188 kB]
Fetched 4,188 kB in 0s (10.1 MB/s)
Selecting previously unselected package libopenblas-dev.
(Reading database ... 51812 files and directories currently installed.)
Unpacking libopenblas-dev (from .../libopenblas-dev_0.1alpha2.2-3_amd64.deb) ...
Setting up libopenblas-dev (0.1alpha2.2-3) ...
update-alternatives: using /usr/lib/openblas-base/libopenblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libscalapack-mpi1
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
liblapack3gf
Suggested packages:
scalapack-doc
The following NEW packages will be installed:
liblapack3gf libscalapack-mpi1
0 upgraded, 2 newly installed, 0 to remove and 61 not upgraded.
Need to get 7,621 kB of archives.
After this operation, 16.6 MB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main liblapack3gf amd64 3.3.1-1 [4,424 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libscalapack-mpi1 amd64 1.8.0-7build1 [3,197 kB]
Fetched 7,621 kB in 0s (16.0 MB/s)
Preconfiguring packages ...
Selecting previously unselected package liblapack3gf.
(Reading database ... 51818 files and directories currently installed.)
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_amd64.deb) ...
Selecting previously unselected package libscalapack-mpi1.
Unpacking libscalapack-mpi1 (from .../libscalapack-mpi1_1.8.0-7build1_amd64.deb) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up libscalapack-mpi1 (1.8.0-7build1) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
ubuntu@ip-172-31-40-91:~$ sudo apt-get install libscalapack-mpi-dev
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
scalapack-doc
The following NEW packages will be installed:
libscalapack-mpi-dev
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 3,546 kB of archives.
After this operation, 10.8 MB of additional disk space will be used.
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/universe libscalapack-mpi-dev amd64 1.8.0-7build1 [3,546 kB]
Fetched 3,546 kB in 0s (16.2 MB/s)
Selecting previously unselected package libscalapack-mpi-dev.
(Reading database ... 51833 files and directories currently installed.)
Unpacking libscalapack-mpi-dev (from .../libscalapack-mpi-dev_1.8.0-7build1_amd64.deb) ...
Setting up libscalapack-mpi-dev (1.8.0-7build1) ...
ubuntu@ip-172-31-40-91:~$ cd /
ubuntu@ip-172-31-40-91:/$ sudo mkdir aclib
ubuntu@ip-172-31-40-91:/$ cd aclib
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "gfortran*"
/usr/bin/gfortran
/usr/bin/gfortran-4.6
/usr/share/vim/vim73/compiler/gfortran.vim
/usr/share/man/man1/gfortran-4.6.1.gz
/usr/share/man/man1/gfortran.1.gz
/usr/share/doc/gfortran
/usr/share/doc/gfortran-4.6
/var/lib/dpkg/info/gfortran.list
/var/lib/dpkg/info/gfortran.postinst
/var/lib/dpkg/info/gfortran.prerm
/var/lib/dpkg/info/gfortran-4.6.list
/var/lib/dpkg/info/gfortran-4.6.md5sums
/var/cache/apt/archives/gfortran_4%3a4.6.3-1ubuntu5_amd64.deb
/var/cache/apt/archives/gfortran-4.6_4.6.3-1ubuntu5_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "libgfortran*"
/usr/share/doc/libgfortran3
/usr/lib/x86_64-linux-gnu/libgfortran.so.3
/usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0
/usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
/usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.a
/usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.spec
/usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortranbegin.a
/var/lib/dpkg/info/libgfortran3:amd64.postrm
/var/lib/dpkg/info/libgfortran3:amd64.shlibs
/var/lib/dpkg/info/libgfortran3:amd64.symbols
/var/lib/dpkg/info/libgfortran3:amd64.md5sums
/var/lib/dpkg/info/libgfortran3:amd64.list
/var/lib/dpkg/info/libgfortran3:amd64.postinst
/var/cache/apt/archives/libgfortran3_4.6.3-1ubuntu5_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$
ubuntu@ip-172-31-40-91:/aclib$
ubuntu@ip-172-31-40-91:/aclib$
ubuntu@ip-172-31-40-91:/aclib$ ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 22:54 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
ubuntu@ip-172-31-40-91:/aclib$ ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:07 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
lrwxrwxrwx 1 root root 48 Jan 23 23:07 libgfortran.so -> /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "libblas*"
/usr/lib/libblas.so
/usr/lib/libblas.so.3gf
/usr/lib/libblas.a
/etc/alternatives/libblas.so
/etc/alternatives/libblas.so.3gf
/etc/alternatives/libblas.a
/var/lib/dpkg/alternatives/libblas.so
/var/lib/dpkg/alternatives/libblas.so.3gf
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/libblas.so
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "liblapack*"
/usr/share/doc/liblapack3gf
/usr/lib/lapack/liblapack.so.3gf
/usr/lib/lapack/liblapack.so.3gf.0
/usr/lib/liblapack.so.3gf
/etc/alternatives/liblapack.so.3gf
/var/lib/dpkg/alternatives/liblapack.so.3gf
/var/lib/dpkg/info/liblapack3gf.list
/var/lib/dpkg/info/liblapack3gf.prerm
/var/lib/dpkg/info/liblapack3gf.shlibs
/var/lib/dpkg/info/liblapack3gf.postrm
/var/lib/dpkg/info/liblapack3gf.templates
/var/lib/dpkg/info/liblapack3gf.postinst
/var/lib/dpkg/info/liblapack3gf.md5sums
/var/lib/dpkg/info/liblapack3gf.config
/var/cache/apt/archives/liblapack3gf_3.3.1-1_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/liblapack.so.3gf
lrwxrwxrwx 1 root root 34 Jan 23 22:53 /usr/lib/liblapack.so.3gf -> /etc/alternatives/liblapack.so.3gf
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/lapack/liblapack.so.3gf
lrwxrwxrwx 1 root root 18 Sep 10 2011 /usr/lib/lapack/liblapack.so.3gf -> liblapack.so.3gf.0
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/lapack/liblapack.so.3gf.0
-rw-r--r-- 1 root root 9342808 Sep 10 2011 /usr/lib/lapack/liblapack.so.3gf.0
ubuntu@ip-172-31-40-91:/aclib$ ln -s /usr/lib/lapack/liblapack.so.3gf.0
ln: failed to create symbolic link `./liblapack.so.3gf.0': Permission denied
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/lapack/liblapack.so.3gf.0
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*libscalapack*"
/usr/share/doc/libscalapack-mpi-dev
/usr/share/doc/libscalapack-mpi1
/usr/lib/libscalapack-openmpi.a
/usr/lib/libscalapack-openmpi.so.1.8.0
/usr/lib/libscalapack-openmpi.so.1
/usr/lib/libscalapack-openmpi.so
/var/lib/dpkg/info/libscalapack-mpi1.postinst
/var/lib/dpkg/info/libscalapack-mpi1.shlibs
/var/lib/dpkg/info/libscalapack-mpi1.list
/var/lib/dpkg/info/libscalapack-mpi-dev.md5sums
/var/lib/dpkg/info/libscalapack-mpi1.postrm
/var/lib/dpkg/info/libscalapack-mpi-dev.list
/var/lib/dpkg/info/libscalapack-mpi1.md5sums
/var/cache/apt/archives/libscalapack-mpi-dev_1.8.0-7build1_amd64.deb
/var/cache/apt/archives/libscalapack-mpi1_1.8.0-7build1_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/libscalapack-openmpi.so
lrwxrwxrwx 1 root root 25 Jan 2 2012 /usr/lib/libscalapack-openmpi.so -> libscalapack-openmpi.so.1
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s libscalapack-openmpi.so.1
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*openblas*"
/usr/share/doc/libopenblas-base
/usr/share/doc/libopenblas-dev
/usr/lib/openblas-base
/usr/lib/openblas-base/libopenblas.so.0
/usr/lib/openblas-base/libopenblas.a
/usr/lib/openblas-base/libopenblas.so
/var/lib/dpkg/info/libopenblas-dev.prerm
/var/lib/dpkg/info/libopenblas-dev.postinst
/var/lib/dpkg/info/libopenblas-base.prerm
/var/lib/dpkg/info/libopenblas-base.list
/var/lib/dpkg/info/libopenblas-base.postinst
/var/lib/dpkg/info/libopenblas-dev.list
/var/lib/dpkg/info/libopenblas-base.md5sums
/var/lib/dpkg/info/libopenblas-dev.md5sums
/var/cache/apt/archives/libopenblas-base_0.1alpha2.2-3_amd64.deb
/var/cache/apt/archives/libopenblas-dev_0.1alpha2.2-3_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/openblas-base/
total 49312
drwxr-xr-x 2 root root 4096 Jan 23 22:52 .
drwxr-xr-x 56 root root 12288 Jan 23 22:53 ..
-rw-r--r-- 1 root root 30981552 Jul 28 2011 libopenblas.a
lrwxrwxrwx 1 root root 16 Jul 28 2011 libopenblas.so -> libopenblas.so.0
-rw-r--r-- 1 root root 19493200 Jul 28 2011 libopenblas.so.0
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/openblas-base/libopenblas.so.0
ubuntu@ip-172-31-40-91:/aclib$
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*mpi*"
/usr/bin/mpirun.openmpi
/usr/bin/ompi-ps
/usr/bin/mpiCC.openmpi
/usr/bin/mpic++
/usr/bin/pycompile
/usr/bin/ompi-restart
/usr/bin/mpicxx.openmpi
/usr/bin/mpiexec
/usr/bin/mpirun
/usr/bin/mpif90
/usr/bin/ompi-server
/usr/bin/mpiCC
/usr/bin/ompi-checkpoint
/usr/bin/mpicxx
/usr/bin/ompi_info
/usr/bin/mpif90.openmpi
/usr/bin/mpicc.openmpi
/usr/bin/cheetah-compile
/usr/bin/ompi-clean
/usr/bin/mpicc
/usr/bin/mpif77.openmpi
/usr/bin/mpic++.openmpi
/usr/bin/mpif77
/usr/bin/ompi-iof
/usr/bin/mpiexec.openmpi
/usr/share/vim/vim73/compiler
/usr/share/openmpi
/usr/share/openmpi/mpicc-vt-wrapper-data.txt
/usr/share/openmpi/help-ompi-crcp-base.txt
/usr/share/openmpi/mpif77.openmpi-wrapper-data.txt
/usr/share/openmpi/help-mpi-btl-tcp.txt
/usr/share/openmpi/help-ompi-crcp-bkmrk.txt
/usr/share/openmpi/help-ompi_info.txt
/usr/share/openmpi/mpif90-vt-wrapper-data.txt
/usr/share/openmpi/mpif90-wrapper-data.txt
/usr/share/openmpi/mpicxx-wrapper-data.txt
/usr/share/openmpi/help-ompi-dpm-orte.txt
/usr/share/openmpi/mpiCC-vt-wrapper-data.txt
/usr/share/openmpi/mpif77-vt-wrapper-data.txt
/usr/share/openmpi/help-mpi-btl-openib.txt
/usr/share/openmpi/mpic++.openmpi-wrapper-data.txt
/usr/share/openmpi/help-mpi-api.txt
/usr/share/openmpi/help-mpi-common-sm.txt
/usr/share/openmpi/help-mpi-runtime.txt
/usr/share/openmpi/mpif77-wrapper-data.txt
/usr/share/openmpi/help-mpi-btl-base.txt
/usr/share/openmpi/help-mpi-errors.txt
/usr/share/openmpi/openmpi-valgrind.supp
/usr/share/openmpi/mpic++-vt-wrapper-data.txt
/usr/share/openmpi/mpicxx.openmpi-wrapper-data.txt
/usr/share/openmpi/mpicc.openmpi-wrapper-data.txt
/usr/share/openmpi/mpiCC-wrapper-data.txt
/usr/share/openmpi/help-ompi-server.txt
/usr/share/openmpi/mpic++-wrapper-data.txt
/usr/share/openmpi/mpicxx-vt-wrapper-data.txt
/usr/share/openmpi/mpicc-wrapper-data.txt
/usr/share/openmpi/help-ompi-pubsub-orte.txt
/usr/share/openmpi/mpiCC.openmpi-wrapper-data.txt
/usr/share/openmpi/help-ompi-dpm-base.txt
/usr/share/openmpi/mpif90.openmpi-wrapper-data.txt
/usr/share/openmpi/help-mpi-btl-openib-cpc-base.txt
/usr/share/man/man1/ompi-clean.1.gz
/usr/share/man/man1/mpif77.1.gz
/usr/share/man/man1/mpicc.openmpi.1.gz
/usr/share/man/man1/ompi_info.1.gz
/usr/share/man/man1/ompi-iof.1.gz
/usr/share/man/man1/mpiexec.1.gz
/usr/share/man/man1/ompi-checkpoint.1.gz
/usr/share/man/man1/mpif90.1.gz
/usr/share/man/man1/mpic++.openmpi.1.gz
/usr/share/man/man1/mpiCC.openmpi.1.gz
/usr/share/man/man1/mpicc.1.gz
/usr/share/man/man1/mpic++.1.gz
/usr/share/man/man1/ompi-restart.1.gz
/usr/share/man/man1/mpicxx.1.gz
/usr/share/man/man1/mpif90.openmpi.1.gz
/usr/share/man/man1/mpirun.openmpi.1.gz
/usr/share/man/man1/ompi-ps.1.gz
/usr/share/man/man1/mpif77.openmpi.1.gz
/usr/share/man/man1/pycompile.1.gz
/usr/share/man/man1/mpiexec.openmpi.1.gz
/usr/share/man/man1/ompi-server.1.gz
/usr/share/man/man1/cheetah-compile.1.gz
/usr/share/man/man1/mpicxx.openmpi.1.gz
/usr/share/man/man1/mpiCC.1.gz
/usr/share/man/man1/mpirun.1.gz
/usr/share/man/man7/ompi_crcp.7.gz
/usr/share/debhelper/autoscripts/postinst-pycompile
/usr/share/pyshared/Cheetah/Compiler.py
/usr/share/mpi-default-dev
/usr/share/doc/libscalapack-mpi-dev
/usr/share/doc/libopenmpi1.3
/usr/share/doc/libscalapack-mpi1
/usr/share/doc/openmpi-checkpoint
/usr/share/doc/mpi-default-bin
/usr/share/doc/libblacs-mpi-dev
/usr/share/doc/mpi-default-dev
/usr/share/doc/libopenmpi-dev
/usr/share/doc/openmpi-bin
/usr/share/doc/libblacs-mpi1
/usr/share/doc/openmpi-common
/usr/lib/libopenmpi_malloc.so.0.0.0
/usr/lib/libmpif90.so
/usr/lib/libmpi_f90.so.0.0.1
/usr/lib/libmpi.so.0
/usr/lib/libblacs-openmpi.so.1.1
/usr/lib/libblacs-openmpi.a
/usr/lib/x86_64-linux-gnu/glib-2.0/glib-compile-resources
/usr/lib/x86_64-linux-gnu/glib-2.0/glib-compile-schemas
/usr/lib/libscalapack-openmpi.a
/usr/lib/libblacsF77init-openmpi.so.1.1
/usr/lib/libscalapack-openmpi.so.1.8.0
/usr/lib/libblacsF77init-openmpi.a
/usr/lib/libmpi_f77.so
/usr/lib/openmpi
/usr/lib/openmpi/lib/mpi.mod
/usr/lib/openmpi/lib/libopenmpi_malloc.so.0.0.0
/usr/lib/openmpi/lib/libvt.fmpi.a
/usr/lib/openmpi/lib/libmpi_f90.so.0.0.1
/usr/lib/openmpi/lib/libopenmpi_malloc.la
/usr/lib/openmpi/lib/libmpi_f77.so
/usr/lib/openmpi/lib/openmpi
/usr/lib/openmpi/lib/openmpi/libompi_dbg_msgq.a
/usr/lib/openmpi/lib/openmpi/libompi_dbg_msgq.so
/usr/lib/openmpi/lib/openmpi/libompi_dbg_msgq.la
/usr/lib/openmpi/lib/libmpi_f90.so
/usr/lib/openmpi/lib/libmpi_f90.la
/usr/lib/openmpi/lib/libmpi.a
/usr/lib/openmpi/lib/libmpi_cxx.a
/usr/lib/openmpi/lib/libmpi_cxx.so
/usr/lib/openmpi/lib/libmpi_f77.a
/usr/lib/openmpi/lib/libmpi.so.0.0.2
/usr/lib/openmpi/lib/libmpi_cxx.la
/usr/lib/openmpi/lib/libmpi_f90.a
/usr/lib/openmpi/lib/libmpi_f77.la
/usr/lib/openmpi/lib/libmpi_cxx.so.0.0.1
/usr/lib/openmpi/lib/libvt.ompi.a
/usr/lib/openmpi/lib/libmpi.la
/usr/lib/openmpi/lib/libvt.mpi.a
/usr/lib/openmpi/lib/libopenmpi_malloc.a
/usr/lib/openmpi/lib/libmpi_f77.so.0.0.1
/usr/lib/openmpi/lib/libopenmpi_malloc.so
/usr/lib/openmpi/lib/libmpi.so
/usr/lib/openmpi/include/mpif-config.h
/usr/lib/openmpi/include/openmpi
/usr/lib/openmpi/include/openmpi/ompi
/usr/lib/openmpi/include/openmpi/ompi/mpi
/usr/lib/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h
/usr/lib/openmpi/include/openmpi/ompi/mpi/f77/prototypes_mpi.h
/usr/lib/openmpi/include/openmpi/ompi/class/ompi_rb_tree.h
/usr/lib/openmpi/include/openmpi/ompi/class/ompi_free_list.h
/usr/lib/openmpi/include/openmpi/ompi/class/ompi_bitmap.h
/usr/lib/openmpi/include/openmpi/ompi/class/ompi_seq_tracker.h
/usr/lib/openmpi/include/openmpi/ompi/debuggers/ompi_common_dll_defs.h
/usr/lib/openmpi/include/openmpi/ompi/debuggers/ompi_msgq_dll_defs.h
/usr/lib/openmpi/include/openmpi/ompi/runtime/ompi_cr.h
/usr/lib/openmpi/include/openmpi/ompi/runtime/mpiruntime.h
/usr/lib/openmpi/include/openmpi/ompi/runtime/ompi_module_exchange.h
/usr/lib/openmpi/include/openmpi/ompi_config.h
/usr/lib/openmpi/include/mpif.h
/usr/lib/openmpi/include/mpif-common.h
/usr/lib/openmpi/include/mpif-mpi-io.h
/usr/lib/openmpi/include/vampirtrace
/usr/lib/openmpi/include/mpi.h
/usr/lib/libmpi_f90.so
/usr/lib/libblacsF77init-openmpi.so.1
/usr/lib/libmpi_cxx.so
/usr/lib/libopenmpi_malloc.so.0
/usr/lib/libblacsCinit-openmpi.so.1.1
/usr/lib/libmpi.so.0.0.2
/usr/lib/libblacsCinit-openmpi.so
/usr/lib/libmpi++.so
/usr/lib/python2.7/compileall.py
/usr/lib/python2.7/dist-packages/Cheetah/Compiler.pyc
/usr/lib/python2.7/dist-packages/Cheetah/Compiler.py
/usr/lib/python2.7/sre_compile.py
/usr/lib/python2.7/py_compile.py
/usr/lib/python2.7/compiler
/usr/lib/python2.7/compileall.pyc
/usr/lib/python2.7/sre_compile.pyc
/usr/lib/python2.7/py_compile.pyc
/usr/lib/python2.7/distutils/msvc9compiler.py
/usr/lib/python2.7/distutils/bcppcompiler.pyc
/usr/lib/python2.7/distutils/ccompiler.pyc
/usr/lib/python2.7/distutils/cygwinccompiler.py
/usr/lib/python2.7/distutils/unixccompiler.py
/usr/lib/python2.7/distutils/msvc9compiler.pyc
/usr/lib/python2.7/distutils/ccompiler.py
/usr/lib/python2.7/distutils/msvccompiler.py
/usr/lib/python2.7/distutils/emxccompiler.pyc
/usr/lib/python2.7/distutils/bcppcompiler.py
/usr/lib/python2.7/distutils/emxccompiler.py
/usr/lib/python2.7/distutils/unixccompiler.pyc
/usr/lib/python2.7/distutils/cygwinccompiler.pyc
/usr/lib/python2.7/distutils/msvccompiler.pyc
/usr/lib/libblacsCinit-openmpi.so.1
/usr/lib/libblacs-openmpi.so
/usr/lib/libblacsCinit-openmpi.a
/usr/lib/libscalapack-openmpi.so.1
/usr/lib/libmpi_f77.so.0
/usr/lib/libscalapack-openmpi.so
/usr/lib/libmpi_cxx.so.0.0.1
/usr/lib/libmpi_f90.so.0
/usr/lib/libblacsF77init-openmpi.so
/usr/lib/libmpi_cxx.so.0
/usr/lib/libmpif77.so
/usr/lib/libblacs-openmpi.so.1
/usr/lib/libmpi_f77.so.0.0.1
/usr/lib/libmpi.so
/usr/include/mpi
/usr/include/openmpi
/usr/src/linux-headers-3.2.0-54-virtual/scripts/mkcompile_h
/usr/src/linux-headers-3.2.0-54-virtual/include/linux/compiler-gcc4.h
/usr/src/linux-headers-3.2.0-54-virtual/include/linux/compiler-gcc3.h
/usr/src/linux-headers-3.2.0-54-virtual/include/linux/compiler.h
/usr/src/linux-headers-3.2.0-54-virtual/include/linux/compiler-intel.h
/usr/src/linux-headers-3.2.0-54-virtual/include/linux/compiler-gcc.h
/usr/src/linux-headers-3.2.0-54-virtual/include/config/pata/mpiix.h
/usr/src/linux-headers-3.2.0-54-virtual/include/config/cross/compile.h
/usr/src/linux-headers-3.2.0-54-virtual/include/config/usb/serial/siemens/mpi.h
/usr/src/linux-headers-3.2.0-54-virtual/include/generated/compile.h
/usr/src/linux-headers-3.2.0-54/scripts/mkcompile_h
/usr/src/linux-headers-3.2.0-54/include/linux/compiler-gcc4.h
/usr/src/linux-headers-3.2.0-54/include/linux/compiler-gcc3.h
/usr/src/linux-headers-3.2.0-54/include/linux/compiler.h
/usr/src/linux-headers-3.2.0-54/include/linux/compiler-intel.h
/usr/src/linux-headers-3.2.0-54/include/linux/compiler-gcc.h
/usr/src/linux-headers-3.2.0-54/arch/powerpc/include/asm/mpic.h
/usr/src/linux-headers-3.2.0-54/arch/alpha/include/asm/compiler.h
/usr/src/linux-headers-3.2.0-54/arch/mips/include/asm/compiler.h
/usr/src/linux-headers-3.2.0-54/Documentation/networking/timestamping
/etc/openmpi
/etc/openmpi/openmpi-mca-params.conf
/etc/openmpi/openmpi-totalview.tcl
/etc/openmpi/openmpi-default-hostfile
/etc/alternatives/libmpif90.so
/etc/alternatives/mpic++
/etc/alternatives/mpif77.1.gz
/etc/alternatives/mpi
/etc/alternatives/mpiexec.1.gz
/etc/alternatives/mpiexec
/etc/alternatives/mpif90.1.gz
/etc/alternatives/mpirun
/etc/alternatives/mpif90
/etc/alternatives/mpiCC
/etc/alternatives/libmpi++.so
/etc/alternatives/mpicc.1.gz
/etc/alternatives/mpic++.1.gz
/etc/alternatives/mpicxx
/etc/alternatives/mpicxx.1.gz
/etc/alternatives/mpicc
/etc/alternatives/libmpif77.so
/etc/alternatives/mpif77
/etc/alternatives/mpiCC.1.gz
/etc/alternatives/mpirun.1.gz
/etc/alternatives/libmpi.so
/var/lib/dpkg/alternatives/mpi
/var/lib/dpkg/alternatives/mpirun
/var/lib/dpkg/info/libopenmpi-dev.preinst
/var/lib/dpkg/info/mpi-default-dev.md5sums
/var/lib/dpkg/info/libblacs-mpi1.postinst
/var/lib/dpkg/info/openmpi-bin.conffiles
/var/lib/dpkg/info/libopenmpi-dev.list
/var/lib/dpkg/info/libscalapack-mpi1.postinst
/var/lib/dpkg/info/libblacs-mpi1.shlibs
/var/lib/dpkg/info/openmpi-bin.postinst
/var/lib/dpkg/info/openmpi-bin.md5sums
/var/lib/dpkg/info/libopenmpi-dev.prerm
/var/lib/dpkg/info/libscalapack-mpi1.shlibs
/var/lib/dpkg/info/mpi-default-bin.md5sums
/var/lib/dpkg/info/libblacs-mpi1.postrm
/var/lib/dpkg/info/openmpi-checkpoint.md5sums
/var/lib/dpkg/info/libscalapack-mpi1.list
/var/lib/dpkg/info/mpi-default-bin.list
/var/lib/dpkg/info/libscalapack-mpi-dev.md5sums
/var/lib/dpkg/info/libscalapack-mpi1.postrm
/var/lib/dpkg/info/libopenmpi1.3.shlibs
/var/lib/dpkg/info/libopenmpi-dev.md5sums
/var/lib/dpkg/info/libopenmpi1.3.list
/var/lib/dpkg/info/libopenmpi1.3.postinst
/var/lib/dpkg/info/openmpi-bin.list
/var/lib/dpkg/info/libopenmpi1.3.md5sums
/var/lib/dpkg/info/libblacs-mpi-dev.md5sums
/var/lib/dpkg/info/libscalapack-mpi-dev.list
/var/lib/dpkg/info/openmpi-common.md5sums
/var/lib/dpkg/info/libblacs-mpi1.md5sums
/var/lib/dpkg/info/libblacs-mpi-dev.list
/var/lib/dpkg/info/libblacs-mpi1.list
/var/lib/dpkg/info/openmpi-bin.prerm
/var/lib/dpkg/info/libopenmpi1.3.postrm
/var/lib/dpkg/info/openmpi-common.list
/var/lib/dpkg/info/libscalapack-mpi1.md5sums
/var/lib/dpkg/info/mpi-default-dev.list
/var/lib/dpkg/info/libopenmpi-dev.postinst
/var/lib/dpkg/info/openmpi-checkpoint.list
/var/cache/apt/archives/mpi-default-bin_1.0.1_amd64.deb
/var/cache/apt/archives/mpi-default-dev_1.0.1_amd64.deb
/var/cache/apt/archives/openmpi-bin_1.4.3-2.1ubuntu3_amd64.deb
/var/cache/apt/archives/libopenmpi1.3_1.4.3-2.1ubuntu3_amd64.deb
/var/cache/apt/archives/libblacs-mpi1_1.1-31ubuntu1_amd64.deb
/var/cache/apt/archives/openmpi-common_1.4.3-2.1ubuntu3_all.deb
/var/cache/apt/archives/libscalapack-mpi-dev_1.8.0-7build1_amd64.deb
/var/cache/apt/archives/libscalapack-mpi1_1.8.0-7build1_amd64.deb
/var/cache/apt/archives/openmpi-checkpoint_1.4.3-2.1ubuntu3_amd64.deb
/var/cache/apt/archives/libblacs-mpi-dev_1.1-31ubuntu1_amd64.deb
/var/cache/apt/archives/libopenmpi-dev_1.4.3-2.1ubuntu3_amd64.deb
/sys/hypervisor/compilation
/sys/hypervisor/compilation/compiler
/sys/hypervisor/compilation/compiled_by
/sys/hypervisor/compilation/compile_date
/aclib/libscalapack-openmpi.so.1
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*mpifh"
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*mpifh*"
ubuntu@ip-172-31-40-91:/aclib$ openmpi
openmpi: command not found
ubuntu@ip-172-31-40-91:/aclib$ open-mpi
open-mpi: command not found
ubuntu@ip-172-31-40-91:/aclib$ ompi_info
Package: Open MPI buildd@yellow Distribution
Open MPI: 1.4.3
Open MPI SVN revision: r23834
Open MPI release date: Oct 05, 2010
Open RTE: 1.4.3
Open RTE SVN revision: r23834
Open RTE release date: Oct 05, 2010
OPAL: 1.4.3
OPAL SVN revision: r23834
OPAL release date: Oct 05, 2010
Ident string: 1.4.3
Prefix: /usr
Configured architecture: x86_64-pc-linux-gnu
Configure host: yellow
Configured by: buildd
Configured on: Thu Mar 29 08:40:17 UTC 2012
Configure host: yellow
Built by: buildd
Built on: Thu Mar 29 08:52:45 UTC 2012
Built host: yellow
C bindings: yes
C++ bindings: yes
Fortran77 bindings: yes (all)
Fortran90 bindings: yes
Fortran90 bindings size: small
C compiler: gcc
C compiler absolute: /usr/bin/gcc
C++ compiler: g++
C++ compiler absolute: /usr/bin/g++
Fortran77 compiler: gfortran
Fortran77 compiler abs: /usr/bin/gfortran
Fortran90 compiler: gfortran
Fortran90 compiler abs: /usr/bin/gfortran
C profiling: yes
C++ profiling: yes
Fortran77 profiling: yes
Fortran90 profiling: yes
C++ exceptions: no
Thread support: posix (mpi: no, progress: no)
Sparse Groups: no
Internal debug support: no
MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
libltdl support: yes
Heterogeneous support: yes
mpirun default --prefix: no
MPI I/O support: yes
MPI_WTIME support: gettimeofday
Symbol visibility support: yes
FT Checkpoint support: yes (checkpoint thread: no)
MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.4.3)
MCA memory: ptmalloc2 (MCA v2.0, API v2.0, Component v1.4.3)
MCA paffinity: linux (MCA v2.0, API v2.0, Component v1.4.3)
MCA carto: auto_detect (MCA v2.0, API v2.0, Component v1.4.3)
MCA carto: file (MCA v2.0, API v2.0, Component v1.4.3)
MCA maffinity: first_use (MCA v2.0, API v2.0, Component v1.4.3)
MCA maffinity: libnuma (MCA v2.0, API v2.0, Component v1.4.3)
MCA timer: linux (MCA v2.0, API v2.0, Component v1.4.3)
MCA installdirs: env (MCA v2.0, API v2.0, Component v1.4.3)
MCA installdirs: config (MCA v2.0, API v2.0, Component v1.4.3)
MCA crs: none (MCA v2.0, API v2.0, Component v1.4.3)
MCA dpm: orte (MCA v2.0, API v2.0, Component v1.4.3)
MCA pubsub: orte (MCA v2.0, API v2.0, Component v1.4.3)
MCA allocator: basic (MCA v2.0, API v2.0, Component v1.4.3)
MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: basic (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: inter (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: self (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: sync (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: tuned (MCA v2.0, API v2.0, Component v1.4.3)
MCA io: romio (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: fake (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: rdma (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: cm (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: crcpw (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: csum (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: v (MCA v2.0, API v2.0, Component v1.4.3)
MCA bml: r2 (MCA v2.0, API v2.0, Component v1.4.3)
MCA rcache: vma (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: ofud (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: openib (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: self (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: tcp (MCA v2.0, API v2.0, Component v1.4.3)
MCA topo: unity (MCA v2.0, API v2.0, Component v1.4.3)
MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.4.3)
MCA osc: rdma (MCA v2.0, API v2.0, Component v1.4.3)
MCA crcp: bkmrk (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: hnp (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: orted (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: tool (MCA v2.0, API v2.0, Component v1.4.3)
MCA oob: tcp (MCA v2.0, API v2.0, Component v1.4.3)
MCA odls: default (MCA v2.0, API v2.0, Component v1.4.3)
MCA ras: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA ras: tm (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: load_balance (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.4.3)
MCA rml: ftrm (MCA v2.0, API v2.0, Component v1.4.3)
MCA rml: oob (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: binomial (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: direct (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: linear (MCA v2.0, API v2.0, Component v1.4.3)
MCA plm: rsh (MCA v2.0, API v2.0, Component v1.4.3)
MCA plm: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA plm: tm (MCA v2.0, API v2.0, Component v1.4.3)
MCA snapc: full (MCA v2.0, API v2.0, Component v1.4.3)
MCA filem: rsh (MCA v2.0, API v2.0, Component v1.4.3)
MCA errmgr: default (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: env (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: hnp (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: singleton (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: tool (MCA v2.0, API v2.0, Component v1.4.3)
MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.4.3)
MCA grpcomm: basic (MCA v2.0, API v2.0, Component v1.4.3)
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*mpi_f77*"
/usr/lib/libmpi_f77.so
/usr/lib/openmpi/lib/libmpi_f77.so
/usr/lib/openmpi/lib/libmpi_f77.a
/usr/lib/openmpi/lib/libmpi_f77.la
/usr/lib/openmpi/lib/libmpi_f77.so.0.0.1
/usr/lib/libmpi_f77.so.0
/usr/lib/libmpi_f77.so.0.0.1
ubuntu@ip-172-31-40-91:/aclib$ ls -la /usr/lib/openmpi/lib/
total 12276
drwxr-xr-x 3 root root 4096 Jan 23 22:51 .
drwxr-xr-x 4 root root 4096 Jan 23 22:51 ..
lrwxrwxrwx 1 root root 25 Mar 29 2012 libmca_common_sm.so -> libmca_common_sm.so.1.0.0
-rw-r--r-- 1 root root 10464 Mar 29 2012 libmca_common_sm.so.1.0.0
-rw-r--r-- 1 root root 4273554 Mar 29 2012 libmpi.a
-rw-r--r-- 1 root root 937384 Mar 29 2012 libmpi_cxx.a
-rw-r--r-- 1 root root 975 Mar 29 2012 libmpi_cxx.la
lrwxrwxrwx 1 root root 19 Mar 29 2012 libmpi_cxx.so -> libmpi_cxx.so.0.0.1
-rw-r--r-- 1 root root 106024 Mar 29 2012 libmpi_cxx.so.0.0.1
-rw-r--r-- 1 root root 697884 Mar 29 2012 libmpi_f77.a
-rw-r--r-- 1 root root 975 Mar 29 2012 libmpi_f77.la
lrwxrwxrwx 1 root root 19 Mar 29 2012 libmpi_f77.so -> libmpi_f77.so.0.0.1
-rw-r--r-- 1 root root 209336 Mar 29 2012 libmpi_f77.so.0.0.1
-rw-r--r-- 1 root root 22406 Mar 29 2012 libmpi_f90.a
-rw-r--r-- 1 root root 975 Mar 29 2012 libmpi_f90.la
lrwxrwxrwx 1 root root 19 Mar 29 2012 libmpi_f90.so -> libmpi_f90.so.0.0.1
-rw-r--r-- 1 root root 14200 Mar 29 2012 libmpi_f90.so.0.0.1
-rw-r--r-- 1 root root 947 Mar 29 2012 libmpi.la
lrwxrwxrwx 1 root root 15 Mar 29 2012 libmpi.so -> libmpi.so.0.0.2
-rw-r--r-- 1 root root 684792 Mar 29 2012 libmpi.so.0.0.2
-rw-r--r-- 1 root root 1382 Mar 29 2012 libopenmpi_malloc.a
-rw-r--r-- 1 root root 1024 Mar 29 2012 libopenmpi_malloc.la
lrwxrwxrwx 1 root root 26 Mar 29 2012 libopenmpi_malloc.so -> libopenmpi_malloc.so.0.0.0
-rw-r--r-- 1 root root 5960 Mar 29 2012 libopenmpi_malloc.so.0.0.0
-rw-r--r-- 1 root root 939048 Mar 29 2012 libopen-pal.a
-rw-r--r-- 1 root root 982 Mar 29 2012 libopen-pal.la
lrwxrwxrwx 1 root root 20 Mar 29 2012 libopen-pal.so -> libopen-pal.so.0.0.0
-rw-r--r-- 1 root root 340200 Mar 29 2012 libopen-pal.so.0.0.0
-rw-r--r-- 1 root root 1399562 Mar 29 2012 libopen-rte.a
-rw-r--r-- 1 root root 982 Mar 29 2012 libopen-rte.la
lrwxrwxrwx 1 root root 20 Mar 29 2012 libopen-rte.so -> libopen-rte.so.0.0.0
-rw-r--r-- 1 root root 312384 Mar 29 2012 libopen-rte.so.0.0.0
-rw-r--r-- 1 root root 219926 Mar 29 2012 libotf.a
-rw-r--r-- 1 root root 890 Mar 29 2012 libotf.la
-rw-r--r-- 1 root root 348408 Mar 29 2012 libvt.a
-rw-r--r-- 1 root root 106062 Mar 29 2012 libvt.fmpi.a
-rw-r--r-- 1 root root 524672 Mar 29 2012 libvt.mpi.a
-rw-r--r-- 1 root root 425398 Mar 29 2012 libvt.omp.a
-rw-r--r-- 1 root root 601202 Mar 29 2012 libvt.ompi.a
-rw-r--r-- 1 root root 298767 Mar 29 2012 mpi.mod
drwxr-xr-x 2 root root 4096 Jan 23 22:51 openmpi
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/openmpi/lib/libmpi_f77.so
ubuntu@ip-172-31-40-91:/aclib$ ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:26 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
lrwxrwxrwx 1 root root 19 Jan 23 23:08 libblas.so -> /usr/lib/libblas.so
lrwxrwxrwx 1 root root 48 Jan 23 23:07 libgfortran.so -> /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
lrwxrwxrwx 1 root root 34 Jan 23 23:15 liblapack.so.3gf.0 -> /usr/lib/lapack/liblapack.so.3gf.0
lrwxrwxrwx 1 root root 34 Jan 23 23:26 libmpi_f77.so -> /usr/lib/openmpi/lib/libmpi_f77.so
lrwxrwxrwx 1 root root 39 Jan 23 23:19 libopenblas.so.0 -> /usr/lib/openblas-base/libopenblas.so.0
lrwxrwxrwx 1 root root 25 Jan 23 23:17 libscalapack-openmpi.so.1 -> libscalapack-openmpi.so.1
ubuntu@ip-172-31-40-91:/aclib$ rm libscalapack-openmpi.so.1
rm: cannot remove `libscalapack-openmpi.so.1': Permission denied
ubuntu@ip-172-31-40-91:/aclib$ sudo rm libscalapack-openmpi.so.1
ubuntu@ip-172-31-40-91:/aclib$ sudo find / -iname "*scalap*"
/usr/share/doc/libscalapack-mpi-dev
/usr/share/doc/libscalapack-mpi1
/usr/lib/libscalapack-openmpi.a
/usr/lib/libscalapack-openmpi.so.1.8.0
/usr/lib/libscalapack-openmpi.so.1
/usr/lib/libscalapack-openmpi.so
/var/lib/dpkg/info/libscalapack-mpi1.postinst
/var/lib/dpkg/info/libscalapack-mpi1.shlibs
/var/lib/dpkg/info/libscalapack-mpi1.list
/var/lib/dpkg/info/libscalapack-mpi-dev.md5sums
/var/lib/dpkg/info/libscalapack-mpi1.postrm
/var/lib/dpkg/info/libscalapack-mpi-dev.list
/var/lib/dpkg/info/libscalapack-mpi1.md5sums
/var/cache/apt/archives/libscalapack-mpi-dev_1.8.0-7build1_amd64.deb
/var/cache/apt/archives/libscalapack-mpi1_1.8.0-7build1_amd64.deb
ubuntu@ip-172-31-40-91:/aclib$ sudo ln -s /usr/lib/libscalapack-openmpi.so
ubuntu@ip-172-31-40-91:/aclib$ ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:30 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
lrwxrwxrwx 1 root root 19 Jan 23 23:08 libblas.so -> /usr/lib/libblas.so
lrwxrwxrwx 1 root root 48 Jan 23 23:07 libgfortran.so -> /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
lrwxrwxrwx 1 root root 34 Jan 23 23:15 liblapack.so.3gf.0 -> /usr/lib/lapack/liblapack.so.3gf.0
lrwxrwxrwx 1 root root 34 Jan 23 23:26 libmpi_f77.so -> /usr/lib/openmpi/lib/libmpi_f77.so
lrwxrwxrwx 1 root root 39 Jan 23 23:19 libopenblas.so.0 -> /usr/lib/openblas-base/libopenblas.so.0
lrwxrwxrwx 1 root root 32 Jan 23 23:30 libscalapack-openmpi.so -> /usr/lib/libscalapack-openmpi.so
ubuntu@ip-172-31-40-91:/aclib$ sudo mkdir nice
ubuntu@ip-172-31-40-91:/aclib$ cd nice
ubuntu@ip-172-31-40-91:/aclib/nice$ ln -s ../libblas.so
ln: failed to create symbolic link `./libblas.so': Permission denied
ubuntu@ip-172-31-40-91:/aclib/nice$ sudo ln -s ../libblas.so
ubuntu@ip-172-31-40-91:/aclib/nice$ sudo ln -s ../libopenblas.so.0 libblas.so
ln: failed to create symbolic link `libblas.so': File exists
ubuntu@ip-172-31-40-91:/aclib/nice$ sudo rm libblas.so
ubuntu@ip-172-31-40-91:/aclib/nice$ sudo su -
root@ip-172-31-40-91:~# ls -la
total 20
drwx------ 3 root root 4096 Jan 23 22:35 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
-rw-r--r-- 1 root root 3106 Apr 19 2012 .bashrc
-rw-r--r-- 1 root root 140 Apr 19 2012 .profile
drwx------ 2 root root 4096 Jan 23 22:35 .ssh
root@ip-172-31-40-91:~# pwd
/root
root@ip-172-31-40-91:~# cd /aclib/
root@ip-172-31-40-91:/aclib# cd nice/
root@ip-172-31-40-91:/aclib/nice# ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:32 .
drwxr-xr-x 3 root root 4096 Jan 23 23:31 ..
root@ip-172-31-40-91:/aclib/nice# ln -s ../
libblas.so liblapack.so.3gf.0 libopenblas.so.0 nice/
libgfortran.so libmpi_f77.so libscalapack-openmpi.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libopenblas.so.0 libblas.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libopenblas.so.0 liblapack.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libscalapack-openmpi.so libscalapack.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libscalapack-openmpi.so libblacs.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libmpi_f77.so
root@ip-172-31-40-91:/aclib/nice# ln -s ../libgfortran.so
root@ip-172-31-40-91:/aclib/nice# ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:42 .
drwxr-xr-x 3 root root 4096 Jan 23 23:31 ..
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libblacs.so -> ../libscalapack-openmpi.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 libblas.so -> ../libopenblas.so.0
lrwxrwxrwx 1 root root 17 Jan 23 23:42 libgfortran.so -> ../libgfortran.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 liblapack.so -> ../libopenblas.so.0
lrwxrwxrwx 1 root root 16 Jan 23 23:41 libmpi_f77.so -> ../libmpi_f77.so
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libscalapack.so -> ../libscalapack-openmpi.so
root@ip-172-31-40-91:/aclib/nice# ls -la ..
total 12
drwxr-xr-x 3 root root 4096 Jan 23 23:31 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
lrwxrwxrwx 1 root root 19 Jan 23 23:08 libblas.so -> /usr/lib/libblas.so
lrwxrwxrwx 1 root root 48 Jan 23 23:07 libgfortran.so -> /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
lrwxrwxrwx 1 root root 34 Jan 23 23:15 liblapack.so.3gf.0 -> /usr/lib/lapack/liblapack.so.3gf.0
lrwxrwxrwx 1 root root 34 Jan 23 23:26 libmpi_f77.so -> /usr/lib/openmpi/lib/libmpi_f77.so
lrwxrwxrwx 1 root root 39 Jan 23 23:19 libopenblas.so.0 -> /usr/lib/openblas-base/libopenblas.so.0
lrwxrwxrwx 1 root root 32 Jan 23 23:30 libscalapack-openmpi.so -> /usr/lib/libscalapack-openmpi.so
drwxr-xr-x 2 root root 4096 Jan 23 23:42 nice
root@ip-172-31-40-91:/aclib/nice# ls -la /usr/lib/libblas.so
lrwxrwxrwx 1 root root 28 Jan 23 22:52 /usr/lib/libblas.so -> /etc/alternatives/libblas.so
root@ip-172-31-40-91:/aclib/nice#
root@ip-172-31-40-91:/aclib/nice#
root@ip-172-31-40-91:/aclib/nice# cd ..
root@ip-172-31-40-91:/aclib# find / -iname "libconfi*"
/usr/share/doc-base/libconfig8
/usr/share/info/libconfig.info.gz
/usr/share/doc/libconfig8
/usr/share/doc/libconfig8-dev
/usr/share/doc/libconfig8-dev/libconfig.pdf.gz
/usr/lib/pkgconfig/libconfig.pc
/usr/lib/libconfig.so.8
/usr/lib/libconfig.a
/usr/lib/libconfig.so.8.0.0
/usr/lib/libconfig.so
/usr/include/libconfig.h
/var/lib/dpkg/info/libconfig8.list
/var/lib/dpkg/info/libconfig8.symbols
/var/lib/dpkg/info/libconfig8.shlibs
/var/lib/dpkg/info/libconfig8.postinst
/var/lib/dpkg/info/libconfig8-dev.md5sums
/var/lib/dpkg/info/libconfig8.md5sums
/var/lib/dpkg/info/libconfig8.postrm
/var/lib/dpkg/info/libconfig8-dev.list
/var/cache/apt/archives/libconfig8_1.3.2-2ubuntu2_amd64.deb
/var/cache/apt/archives/libconfig8-dev_1.3.2-2ubuntu2_amd64.deb
root@ip-172-31-40-91:/aclib# ln -s /usr/lib/libconfig.so
root@ip-172-31-40-91:/aclib# cd nice
root@ip-172-31-40-91:/aclib/nice# ln ../libconfig.so
root@ip-172-31-40-91:/aclib/nice# ls -la
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:45 .
drwxr-xr-x 3 root root 4096 Jan 23 23:45 ..
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libblacs.so -> ../libscalapack-openmpi.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 libblas.so -> ../libopenblas.so.0
lrwxrwxrwx 2 root root 21 Jan 23 23:45 libconfig.so -> /usr/lib/libconfig.so
lrwxrwxrwx 1 root root 17 Jan 23 23:42 libgfortran.so -> ../libgfortran.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 liblapack.so -> ../libopenblas.so.0
lrwxrwxrwx 1 root root 16 Jan 23 23:41 libmpi_f77.so -> ../libmpi_f77.so
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libscalapack.so -> ../libscalapack-openmpi.so
root@ip-172-31-40-91:/aclib/nice# Write failed: Broken pipe
ps-MacBook-Air:~ pi$ ping www.google.com
ping: cannot resolve www.google.com: Unknown host
ps-MacBook-Air:~ pi$
ps-MacBook-Air:~ pi$ scp -r -i ~/Downloads/EC2_free_keypair.pem ~/Dev/HRTF/acousto_pi ubuntu@ec2-54-200-77-138.us-west-2.compute.amazonaws.com:/home/ubuntu
.DS_Store 100% 12KB 12.0KB/s 00:00
aclocal.m4 100% 41KB 40.9KB/s 00:00
:
:
:
100% 1330 1.3KB/s 00:00
tst.txt 100% 19KB 19.4KB/s 00:00
tst_out.txt 100% 3610 3.5KB/s 00:00
ps-MacBook-Air:~ pi$ ssh -v -i ~/Downloads/EC2_free_keypair.pem ubuntu@ec2-54-200-77-138.us-west-2.compute.amazonaws.com
OpenSSH_6.2p2, OSSLShim 0.9.8r 8 Dec 2011
debug1: Reading configuration data /Users/pi/.ssh/config
debug1: Reading configuration data /etc/ssh_config
debug1: /etc/ssh_config line 20: Applying options for *
debug1: Connecting to ec2-54-200-77-138.us-west-2.compute.amazonaws.com [54.200.77.138] port 22.
debug1: Connection established.
debug1: identity file /Users/pi/Downloads/EC2_free_keypair.pem type -1
debug1: identity file /Users/pi/Downloads/EC2_free_keypair.pem-cert type -1
debug1: Enabling compatibility mode for protocol 2.0
debug1: Local version string SSH-2.0-OpenSSH_6.2
debug1: Remote protocol version 2.0, remote software version OpenSSH_5.9p1 Debian-5ubuntu1.1
debug1: match: OpenSSH_5.9p1 Debian-5ubuntu1.1 pat OpenSSH_5*
debug1: SSH2_MSG_KEXINIT sent
debug1: SSH2_MSG_KEXINIT received
debug1: kex: server->client aes128-ctr hmac-md5 none
debug1: kex: client->server aes128-ctr hmac-md5 none
debug1: SSH2_MSG_KEX_DH_GEX_REQUEST(1024<1024<8192) sent
debug1: expecting SSH2_MSG_KEX_DH_GEX_GROUP
debug1: SSH2_MSG_KEX_DH_GEX_INIT sent
debug1: expecting SSH2_MSG_KEX_DH_GEX_REPLY
debug1: Server host key: RSA b6:31:33:a2:15:e8:64:e7:ff:62:26:b3:e3:99:1b:06
debug1: Host 'ec2-54-200-77-138.us-west-2.compute.amazonaws.com' is known and matches the RSA host key.
debug1: Found key in /Users/pi/.ssh/known_hosts:5
debug1: ssh_rsa_verify: signature correct
debug1: SSH2_MSG_NEWKEYS sent
debug1: expecting SSH2_MSG_NEWKEYS
debug1: SSH2_MSG_NEWKEYS received
debug1: Roaming not allowed by server
debug1: SSH2_MSG_SERVICE_REQUEST sent
debug1: SSH2_MSG_SERVICE_ACCEPT received
debug1: Authentications that can continue: publickey
debug1: Next authentication method: publickey
debug1: Trying private key: /Users/pi/Downloads/EC2_free_keypair.pem
debug1: read PEM private key done: type RSA
debug1: Authentication succeeded (publickey).
Authenticated to ec2-54-200-77-138.us-west-2.compute.amazonaws.com ([54.200.77.138]:22).
debug1: channel 0: new [client-session]
debug1: Requesting no-more-sessions@openssh.com
debug1: Entering interactive session.
debug1: Sending environment.
debug1: Sending env LANG = en_GB.UTF-8
Welcome to Ubuntu 12.04.3 LTS (GNU/Linux 3.2.0-54-virtual x86_64)
* Documentation: https://help.ubuntu.com/
System information as of Fri Jan 24 01:26:39 UTC 2014
System load: 0.06 Processes: 64
Usage of /: 15.6% of 7.87GB Users logged in: 1
Memory usage: 45% IP address for eth0: 172.31.40.91
Swap usage: 0%
Graph this data and manage this system at https://landscape.canonical.com/
Get cloud support with Ubuntu Advantage Cloud Guest:
http://www.ubuntu.com/business/services/cloud
Use Juju to deploy your cloud instances and workloads:
https://juju.ubuntu.com/#cloud-precise
Last login: Thu Jan 23 22:43:54 2014 from cpc2-oxfd18-2-0-cust90.4-3.cable.virginm.net
ubuntu@ip-172-31-40-91:~$ ls -la
total 32
drwxr-xr-x 5 ubuntu ubuntu 4096 Jan 24 01:16 .
drwxr-xr-x 3 root root 4096 Oct 3 07:06 ..
drwxr-xr-x 12 ubuntu ubuntu 4096 Jan 24 01:26 acousto_pi
-rw-r--r-- 1 ubuntu ubuntu 220 Apr 3 2012 .bash_logout
-rw-r--r-- 1 ubuntu ubuntu 3486 Apr 3 2012 .bashrc
drwx------ 2 ubuntu ubuntu 4096 Jan 23 22:43 .cache
-rw-r--r-- 1 ubuntu ubuntu 675 Apr 3 2012 .profile
drwx------ 2 ubuntu ubuntu 4096 Jan 23 22:35 .ssh
-rw-r--r-- 1 ubuntu ubuntu 0 Jan 23 22:46 .sudo_as_admin_successful
ubuntu@ip-172-31-40-91:~$ sudo su -
root@ip-172-31-40-91:~# apt-get install libtool
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
autotools-dev libltdl-dev libltdl7
Suggested packages:
libtool-doc autoconf automaken gcj
The following NEW packages will be installed:
autotools-dev libltdl-dev libltdl7 libtool
0 upgraded, 4 newly installed, 0 to remove and 61 not upgraded.
Need to get 585 kB of archives.
After this operation, 2,967 kB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libltdl7 amd64 2.4.2-1ubuntu1 [37.6 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main autotools-dev all 20120210.1ubuntu1 [42.4 kB]
Get:3 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libltdl-dev amd64 2.4.2-1ubuntu1 [202 kB]
Get:4 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main libtool amd64 2.4.2-1ubuntu1 [302 kB]
Fetched 585 kB in 0s (2,907 kB/s)
Selecting previously unselected package libltdl7.
(Reading database ... 51838 files and directories currently installed.)
Unpacking libltdl7 (from .../libltdl7_2.4.2-1ubuntu1_amd64.deb) ...
Selecting previously unselected package autotools-dev.
Unpacking autotools-dev (from .../autotools-dev_20120210.1ubuntu1_all.deb) ...
Selecting previously unselected package libltdl-dev.
Unpacking libltdl-dev (from .../libltdl-dev_2.4.2-1ubuntu1_amd64.deb) ...
Selecting previously unselected package libtool.
Unpacking libtool (from .../libtool_2.4.2-1ubuntu1_amd64.deb) ...
Processing triggers for man-db ...
Setting up libltdl7 (2.4.2-1ubuntu1) ...
Setting up autotools-dev (20120210.1ubuntu1) ...
Setting up libltdl-dev (2.4.2-1ubuntu1) ...
Setting up libtool (2.4.2-1ubuntu1) ...
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
root@ip-172-31-40-91:~# apt-get install autoconf
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following extra packages will be installed:
automake m4
Suggested packages:
autoconf2.13 autoconf-archive gnu-standards autoconf-doc gettext
The following NEW packages will be installed:
autoconf automake m4
0 upgraded, 3 newly installed, 0 to remove and 61 not upgraded.
Need to get 1,332 kB of archives.
After this operation, 3,851 kB of additional disk space will be used.
Do you want to continue [Y/n]? y
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main m4 amd64 1.4.16-2ubuntu1 [200 kB]
Get:2 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main autoconf all 2.68-1ubuntu2 [560 kB]
Get:3 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise/main automake all 1:1.11.3-1ubuntu2 [571 kB]
Fetched 1,332 kB in 0s (4,954 kB/s)
Selecting previously unselected package m4.
(Reading database ... 51934 files and directories currently installed.)
Unpacking m4 (from .../m4_1.4.16-2ubuntu1_amd64.deb) ...
Selecting previously unselected package autoconf.
Unpacking autoconf (from .../autoconf_2.68-1ubuntu2_all.deb) ...
Selecting previously unselected package automake.
Unpacking automake (from .../automake_1%3a1.11.3-1ubuntu2_all.deb) ...
Processing triggers for install-info ...
Processing triggers for man-db ...
Setting up m4 (1.4.16-2ubuntu1) ...
Setting up autoconf (2.68-1ubuntu2) ...
Setting up automake (1:1.11.3-1ubuntu2) ...
update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode.
root@ip-172-31-40-91:~# pwd
/root
root@ip-172-31-40-91:~# cd /
root@ip-172-31-40-91:/# ls
aclib boot etc initrd.img lib64 media opt root sbin srv tmp var
bin dev home lib lost+found mnt proc run selinux sys usr vmlinuz
root@ip-172-31-40-91:/# cd home
root@ip-172-31-40-91:/home# ls
ubuntu
root@ip-172-31-40-91:/home# cd ubuntu/
root@ip-172-31-40-91:/home/ubuntu# ls
acousto_pi
root@ip-172-31-40-91:/home/ubuntu# cd acousto_pi/
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -laR /aclib/
/aclib/:
total 12
drwxr-xr-x 3 root root 4096 Jan 23 23:45 .
drwxr-xr-x 24 root root 4096 Jan 23 22:54 ..
lrwxrwxrwx 1 root root 19 Jan 23 23:08 libblas.so -> /usr/lib/libblas.so
lrwxrwxrwx 2 root root 21 Jan 23 23:45 libconfig.so -> /usr/lib/libconfig.so
lrwxrwxrwx 1 root root 48 Jan 23 23:07 libgfortran.so -> /usr/lib/gcc/x86_64-linux-gnu/4.6/libgfortran.so
lrwxrwxrwx 1 root root 34 Jan 23 23:15 liblapack.so.3gf.0 -> /usr/lib/lapack/liblapack.so.3gf.0
lrwxrwxrwx 1 root root 34 Jan 23 23:26 libmpi_f77.so -> /usr/lib/openmpi/lib/libmpi_f77.so
lrwxrwxrwx 1 root root 39 Jan 23 23:19 libopenblas.so.0 -> /usr/lib/openblas-base/libopenblas.so.0
lrwxrwxrwx 1 root root 32 Jan 23 23:30 libscalapack-openmpi.so -> /usr/lib/libscalapack-openmpi.so
drwxr-xr-x 2 root root 4096 Jan 23 23:45 nice
/aclib/nice:
total 8
drwxr-xr-x 2 root root 4096 Jan 23 23:45 .
drwxr-xr-x 3 root root 4096 Jan 23 23:45 ..
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libblacs.so -> ../libscalapack-openmpi.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 libblas.so -> ../libopenblas.so.0
lrwxrwxrwx 2 root root 21 Jan 23 23:45 libconfig.so -> /usr/lib/libconfig.so
lrwxrwxrwx 1 root root 17 Jan 23 23:42 libgfortran.so -> ../libgfortran.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 liblapack.so -> ../libopenblas.so.0
lrwxrwxrwx 1 root root 16 Jan 23 23:41 libmpi_f77.so -> ../libmpi_f77.so
lrwxrwxrwx 1 root root 26 Jan 23 23:41 libscalapack.so -> ../libscalapack-openmpi.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# history
1* apt-get install
2 apt-get install autoconf
3 pwd
4 cd ~
5 ls
6 cd /
7 ls
8 cd home
9 ls
10 cd ubuntu/
11 ls
12 cd acousto_pi/
13 ls -lar /aclib/
14 ls -laR /aclib/
15 history
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ./configure --with-libs=/aclib/nice
configure: * * * * * * * A C O U S T O configure.ac for Acousto ver. 1.6 * * * * * * *
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... no
checking whether make supports nested variables... no
configure: --> Checking for programs...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... none
checking dependency style of gcc... none
checking whether make sets $(MAKE)... (cached) no
checking for robodoc... false
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
configure: --> Compatible host detected: x86_64-unknown-linux-gnu
configure: --> Searching /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin for MPICC compiler...
checking for mpicc... /usr/bin/mpicc
configure: --> ... Found at: /usr/bin/mpicc
checking for config_init in -lconfig... yes
configure: --> libconfig found
configure: Checking user-supplied libs for ATLAS...
checking for ATL_zgemm in -latlas... no
configure: ... Could not find Atlas!
checking for dgemm_ in -lblas... no
configure: error: Failed to auto-locate BLAS
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm /aclib/nice/libblas.so | grep "dgemm_"
nm: /aclib/nice/libblas.so: no symbols
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm /aclib/nice/libblas.so
nm: /aclib/nice/libblas.so: no symbols
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -la /aclib/nice/libblas.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 /aclib/nice/libblas.so -> ../libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -la /aclib/libopenblas.so.0
lrwxrwxrwx 1 root root 39 Jan 23 23:19 /aclib/libopenblas.so.0 -> /usr/lib/openblas-base/libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -la /usr/lib/openblas-base/libopenblas.so.0
-rw-r--r-- 1 root root 19493200 Jul 28 2011 /usr/lib/openblas-base/libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm /usr/lib/openblas-base/libopenblas.so.0
nm: /usr/lib/openblas-base/libopenblas.so.0: no symbols
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# size /usr/lib/openblas-base/libopenblas.so.0
text data bss dec hex filename
19405301 81168 33976 19520445 129dbbd /usr/lib/openblas-base/libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls
aclocal.m4 aux_build config.log configure.ac_orig freq2imp.py Makefile.am NEWS README tst_out.txt
AUTHORS blender configure COPYING INSTALL Makefile.in php src tst.txt
autom4te.cache ChangeLog configure.ac doc m4 mysql pi_head tmp_build
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# vi configure.ac
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# cat configure.ac | grep "gfortran"
FORTRAN_libs="-lgfortran"
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# autoreconf -if
root@ip-172-31-40-91:/home/ubuntu/acousto_pi#
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ./configure --with-libs=/aclib/nice
configure: * * * * * * * A C O U S T O configure.ac for Acousto ver. 1.6 * * * * * * *
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... no
configure: --> Checking for programs...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... none
checking dependency style of gcc... none
checking whether gcc and cc understand -c and -o together... yes
checking whether make sets $(MAKE)... (cached) no
checking for robodoc... false
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
configure: --> Compatible host detected: x86_64-unknown-linux-gnu
configure: --> Searching /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin for MPICC compiler...
checking for mpicc... /usr/bin/mpicc
configure: --> ... Found at: /usr/bin/mpicc
checking for config_init in -lconfig... yes
configure: --> libconfig found
configure: Checking user-supplied libs for ATLAS...
checking for ATL_zgemm in -latlas... no
configure: ... Could not find Atlas!
checking for dgemm_ in -lblas... yes
configure: --> Auto-Located BLAS
checking for zgegv_ in -llapack... no
configure: error: Failed to find LAPACK
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls /aclib/nice/
libblacs.so libblas.so libconfig.so libgfortran.so liblapack.so libmpi_f77.so libscalapack.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -la /aclib/nice/liblapack.so
lrwxrwxrwx 1 root root 19 Jan 23 23:40 /aclib/nice/liblapack.so -> ../libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm -D /usr/lib/openblas-base/libopenblas.so.0 | grep "zgegv_"
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls /usr/lib/openblas-base
libopenblas.a libopenblas.so libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ls -la /usr/lib/openblas-base
total 49312
drwxr-xr-x 2 root root 4096 Jan 23 22:52 .
drwxr-xr-x 56 root root 12288 Jan 23 22:53 ..
-rw-r--r-- 1 root root 30981552 Jul 28 2011 libopenblas.a
lrwxrwxrwx 1 root root 16 Jul 28 2011 libopenblas.so -> libopenblas.so.0
-rw-r--r-- 1 root root 19493200 Jul 28 2011 libopenblas.so.0
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm -D /usr/lib/openblas-base/libopenblas.a | grep "zgegv_"
nm: saxpy.o: No symbols
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# find / -iname "liblapack*"
/usr/share/doc/liblapack3gf
/usr/lib/lapack/liblapack.so.3gf
/usr/lib/lapack/liblapack.so.3gf.0
/usr/lib/liblapack.so.3gf
/etc/alternatives/liblapack.so.3gf
/var/lib/dpkg/alternatives/liblapack.so.3gf
/var/lib/dpkg/info/liblapack3gf.list
/var/lib/dpkg/info/liblapack3gf.prerm
/var/lib/dpkg/info/liblapack3gf.shlibs
/var/lib/dpkg/info/liblapack3gf.postrm
/var/lib/dpkg/info/liblapack3gf.templates
/var/lib/dpkg/info/liblapack3gf.postinst
/var/lib/dpkg/info/liblapack3gf.md5sums
/var/lib/dpkg/info/liblapack3gf.config
/var/cache/apt/archives/liblapack3gf_3.3.1-1_amd64.deb
/aclib/liblapack.so.3gf.0
/aclib/nice/liblapack.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# mv /aclib/nice/liblapack.so /aclib/nice/_liblapack.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ln -s /etc/alternatives/liblapack.so.3gf /aclib/nice/liblapack.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# nm -D /aclib/nice/liblapack.so | grep "zgegv_"
00000000006ea700 T zgegv_
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# mv /aclib/nice/libblas.so /aclib/nice/_libblas.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# find / -iname "libblas*"
/usr/lib/libblas.so
/usr/lib/libblas.so.3gf
/usr/lib/libblas.a
/etc/alternatives/libblas.so
/etc/alternatives/libblas.so.3gf
/etc/alternatives/libblas.a
/var/lib/dpkg/alternatives/libblas.so
/var/lib/dpkg/alternatives/libblas.so.3gf
/aclib/libblas.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ln -s /etc/alternatives/libblas.so /aclib/nice/libblas.so
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ./configure --with-libs=/aclib/nice
configure: * * * * * * * A C O U S T O configure.ac for Acousto ver. 1.6 * * * * * * *
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... no
configure: --> Checking for programs...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... none
checking dependency style of gcc... none
checking whether gcc and cc understand -c and -o together... yes
checking whether make sets $(MAKE)... (cached) no
checking for robodoc... false
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
configure: --> Compatible host detected: x86_64-unknown-linux-gnu
configure: --> Searching /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin for MPICC compiler...
checking for mpicc... /usr/bin/mpicc
configure: --> ... Found at: /usr/bin/mpicc
checking for config_init in -lconfig... yes
configure: --> libconfig found
configure: Checking user-supplied libs for ATLAS...
checking for ATL_zgemm in -latlas... no
configure: ... Could not find Atlas!
checking for dgemm_ in -lblas... yes
configure: --> Auto-Located BLAS
checking for zgegv_ in -llapack... yes
configure: --> Got LAPACK
checking for MPI_Init in -lmpi_f77... yes
checking for MPI_Init in -lmpi_mpifh... no
configure: --> Setting MPI_FORTRAN_libs: -lmpi_f77
configure: --> Attempting to locate BLACS...
checking for Cblacs_pinfo in -lblacsCinit... no
checking for Cblacs_pinfo in -lblacsC... no
checking for Cblacs_pinfo in -lmpiblacsCinit... no
checking for Cblacs_pinfo in -lblacsCinit_MPI... no
checking for Cblacs_pinfo in -lblacsCinit-openmpi... yes
checking for sl_init_ in -lscalapack... yes
configure: --> scaLapack found & working
configure: --> --------------------------
configure: --> -------- Summary ---------
configure: --> --------------------------
configure: --> LIBCONFIG : -lconfig
configure: --> FORTRAN : -lgfortran
configure: --> BLAS : -lblas
configure: --> LAPACK : -llapack
configure: --> MPI FORTRAN : -lmpi_f77
configure: --> BLACS : -lblacsCinit-openmpi -lblacs-openmpi -lblacsCinit-openmpi
configure: --> SCALAPACK : -lscalapack
configure: --> MYSQL_LIBS :
configure: --> CFLAGS : -g -O2
configure: --> LDFLAGS : -L/aclib/nice
configure: --> --------------------------
./configure: line 4561: 0: command not found
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: executing depfiles commands
root@ip-172-31-40-91:/home/ubuntu/acousto_pi#
root@ip-172-31-40-91:/home/ubuntu/acousto_pi#
root@ip-172-31-40-91:/home/ubuntu/acousto_pi#
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# sed -n '4500,4600p' ./configure
CFLAGS="$CFLAGS -D_MYSQL_";
MySQL_libs="-lmysqlclient";
have_MySQL="1"
fi
fi
# Wrapping up
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> --------------------------" >&5
$as_echo "$as_me: --> --------------------------" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> -------- Summary ---------" >&5
$as_echo "$as_me: --> -------- Summary ---------" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> --------------------------" >&5
$as_echo "$as_me: --> --------------------------" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> LIBCONFIG : $libConfig_LIBS" >&5
$as_echo "$as_me: --> LIBCONFIG : $libConfig_LIBS" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> FORTRAN : $FORTRAN_libs" >&5
$as_echo "$as_me: --> FORTRAN : $FORTRAN_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> BLAS : $BLAS_libs" >&5
$as_echo "$as_me: --> BLAS : $BLAS_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> LAPACK : $LAPACK_libs" >&5
$as_echo "$as_me: --> LAPACK : $LAPACK_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> MPI FORTRAN : $MPI_FORTRAN_libs" >&5
$as_echo "$as_me: --> MPI FORTRAN : $MPI_FORTRAN_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> BLACS : $BLACS_libs" >&5
$as_echo "$as_me: --> BLACS : $BLACS_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> SCALAPACK : $SCALAPACK_libs" >&5
$as_echo "$as_me: --> SCALAPACK : $SCALAPACK_libs" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> MYSQL_LIBS : $MYSQL_LIBS" >&5
$as_echo "$as_me: --> MYSQL_LIBS : $MYSQL_LIBS" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> CFLAGS : $CFLAGS" >&5
$as_echo "$as_me: --> CFLAGS : $CFLAGS" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> LDFLAGS : $LDFLAGS" >&5
$as_echo "$as_me: --> LDFLAGS : $LDFLAGS" >&6;}
{ $as_echo "$as_me:${as_lineno-$LINENO}: --> --------------------------" >&5
$as_echo "$as_me: --> --------------------------" >&6;}
#AC_MSG_NOTICE( --> [ATLAS : $ATLAS_LIBS]) <--these have got amalgamated into BLAS_libs
#AC_MSG_NOTICE( --> [MPI_VER : $mpi_version])
# π trying to avoid using capitals, however this saves me having to edit attachment points in /src/Makefile.am
math_libs="$SCALAPACK_libs $BLACS_libs $LAPACK_libs $BLAS_libs $FORTRAN_libs -lm $MPI_FORTRAN_libs"
# ----------------------------------------------
# AUTOCONF substitutions
# ----------------------------------------------
#AC_SUBST([CFGPARSE_DIR]) <-- 'grep -r "CFGPARSE_DIR" .' suggests this is never used, same for ROBODOC
#AC_SUBST([ROBODOC])
#AM_CONDITIONAL(ROBODOC_FOUND, test x$robodoc_pathfile != xfalse)
if $have_MySQL; then
have_MySQL_TRUE=
have_MySQL_FALSE='#'
else
have_MySQL_TRUE='#'
have_MySQL_FALSE=
fi
cat >confcache <<\_ACEOF
# This file is a shell script that caches the results of configure
# tests run on this system so they can be shared between configure
# scripts and configure runs, see configure's option --config-cache.
# It is not useful on other systems. If it contains results you don't
# want to keep, you may remove or edit it.
#
# config.status only pays attention to the cache file if you give it
# the --recheck option to rerun configure.
#
# `ac_cv_env_foo' variables (set or unset) will be overridden when
# loading this file, other *unset* `ac_cv_foo' will be assigned the
# following values.
_ACEOF
# The following way of writing the cache mishandles newlines in values,
# but we know of no workaround that is simple, portable, and efficient.
# So, we kill variables containing newlines.
# Ultrix sh set writes to stderr and can't be redirected directly,
# and sets the high bit in the cache file unless we assign to the vars.
(
for ac_var in `(set) 2>&1 | sed -n 's/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'`; do
eval ac_val=\$$ac_var
case $ac_val in #(
*${as_nl}*)
case $ac_var in #(
*_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
esac
case $ac_var in #(
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# sed -n '4558,4568p' ./configure
#AC_SUBST([ROBODOC])
#AM_CONDITIONAL(ROBODOC_FOUND, test x$robodoc_pathfile != xfalse)
if $have_MySQL; then
have_MySQL_TRUE=
have_MySQL_FALSE='#'
else
have_MySQL_TRUE='#'
have_MySQL_FALSE=
fi
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# vi ./configure.ac
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# vi ./configure.ac
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# autoreconf -if
src/Makefile.am:4: have_MySQL does not appear in AM_CONDITIONAL
autoreconf: automake failed with exit status: 1
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# vi ./configure.ac
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# autoreconf -if
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# ./configure --with-libs=/aclib/nice
configure: * * * * * * * A C O U S T O configure.ac for Acousto ver. 1.6 * * * * * * *
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... no
configure: --> Checking for programs...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... none
checking dependency style of gcc... none
checking whether gcc and cc understand -c and -o together... yes
checking whether make sets $(MAKE)... (cached) no
checking for robodoc... false
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
configure: --> Compatible host detected: x86_64-unknown-linux-gnu
configure: --> Searching /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin for MPICC compiler...
checking for mpicc... /usr/bin/mpicc
configure: --> ... Found at: /usr/bin/mpicc
checking for config_init in -lconfig... yes
configure: --> libconfig found
configure: Checking user-supplied libs for ATLAS...
checking for ATL_zgemm in -latlas... no
configure: ... Could not find Atlas!
checking for dgemm_ in -lblas... yes
configure: --> Auto-Located BLAS
checking for zgegv_ in -llapack... yes
configure: --> Got LAPACK
checking for MPI_Init in -lmpi_f77... yes
checking for MPI_Init in -lmpi_mpifh... no
configure: --> Setting MPI_FORTRAN_libs: -lmpi_f77
configure: --> Attempting to locate BLACS...
checking for Cblacs_pinfo in -lblacsCinit... no
checking for Cblacs_pinfo in -lblacsC... no
checking for Cblacs_pinfo in -lmpiblacsCinit... no
checking for Cblacs_pinfo in -lblacsCinit_MPI... no
checking for Cblacs_pinfo in -lblacsCinit-openmpi... yes
checking for sl_init_ in -lscalapack... yes
configure: --> scaLapack found & working
configure: --> --------------------------
configure: --> -------- Summary ---------
configure: --> --------------------------
configure: --> LIBCONFIG : -lconfig
configure: --> FORTRAN : -lgfortran
configure: --> BLAS : -lblas
configure: --> LAPACK : -llapack
configure: --> MPI FORTRAN : -lmpi_f77
configure: --> BLACS : -lblacsCinit-openmpi -lblacs-openmpi -lblacsCinit-openmpi
configure: --> SCALAPACK : -lscalapack
configure: --> MYSQL_LIBS :
configure: --> CFLAGS : -g -O2
configure: --> LDFLAGS : -L/aclib/nice
configure: --> --------------------------
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: executing depfiles commands
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# make
The program 'make' is currently not installed. You can install it by typing:
apt-get install make
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# wibble
No command 'wibble' found, did you mean:
Command 'wobble' from package 'emboss' (universe)
wibble: command not found
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# apt-get install make
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
make-doc
The following NEW packages will be installed:
make
0 upgraded, 1 newly installed, 0 to remove and 61 not upgraded.
Need to get 119 kB of archives.
After this operation, 324 kB of additional disk space will be used.
Get:1 http://us-west-2.ec2.archive.ubuntu.com/ubuntu/ precise-updates/main make amd64 3.81-8.1ubuntu1.1 [119 kB]
Fetched 119 kB in 0s (1,028 kB/s)
Selecting previously unselected package make.
(Reading database ... 52213 files and directories currently installed.)
Unpacking make (from .../make_3.81-8.1ubuntu1.1_amd64.deb) ...
Processing triggers for man-db ...
Setting up make (3.81-8.1ubuntu1.1) ...
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# make
Making all in src
make[1]: Entering directory `/home/ubuntu/acousto_pi/src'
source='main.c' object='acousto-main.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-main.o `test -f 'main.c' || echo './'`main.c
main.c: In function ‘main’:
main.c:305:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:306:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:387:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:388:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:389:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:391:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:393:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:427:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:430:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:431:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:433:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:479:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:535:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:537:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:545:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:583:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:585:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:595:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:636:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:638:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:640:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:764:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:766:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:774:9: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:908:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:911:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:914:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:944:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:955:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:956:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:962:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:963:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:978:3: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:986:3: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:987:3: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:988:3: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1012:3: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1044:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1045:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1046:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1047:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1048:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1049:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1050:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1051:5: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1100:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1131:11: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1133:11: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:1167:7: warning: passing argument 3 of ‘config_lookup_int’ from incompatible pointer type [enabled by default]
/usr/include/libconfig.h:235:26: note: expected ‘long int *’ but argument is of type ‘int *’
main.c:145:7: warning: variable ‘mpierr’ set but not used [-Wunused-but-set-variable]
main.c: In function ‘cleanup’:
main.c:1400:25: warning: the comparison will always evaluate as ‘true’ for the address of ‘config’ will never be NULL [-Waddress]
main.c:1397:7: warning: variable ‘nfreq’ set but not used [-Wunused-but-set-variable]
main.c: In function ‘MPI_AcouSTO_structs’:
main.c:1786:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1786:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1789:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1789:45: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1792:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1792:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1795:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1795:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1798:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1798:42: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1801:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1801:45: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1804:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1804:45: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1807:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1807:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1810:21: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1810:45: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1813:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1813:44: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1816:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1816:44: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1819:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1819:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1822:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1822:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1825:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1825:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1828:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1828:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1831:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1831:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1834:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1834:43: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1837:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1837:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1840:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1840:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1843:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1843:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1846:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1846:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1849:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1849:50: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1852:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1852:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1855:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1855:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1858:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1858:51: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1861:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1861:52: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1864:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1864:52: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1867:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1867:49: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1870:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1870:54: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1873:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1873:54: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1876:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1876:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1879:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1879:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1882:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1882:49: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1885:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1885:53: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1888:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1888:47: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1891:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1891:59: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1894:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1894:48: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1897:22: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1897:47: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1911:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1911:42: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1925:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1925:36: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1928:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1928:42: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1931:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c:1931:34: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
main.c: In function ‘main’:
main.c:445:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:453:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:460:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:463:18: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:712:18: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:722:18: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:725:20: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
main.c:1323:13: warning: ‘rawtime3’ may be used uninitialized in this function [-Wuninitialized]
main.c:1322:13: warning: ‘rawtime2’ may be used uninitialized in this function [-Wuninitialized]
source='geom.c' object='acousto-geom.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-geom.o `test -f 'geom.c' || echo './'`geom.c
geom.c: In function ‘georeader’:
geom.c:64:18: warning: variable ‘nintt’ set but not used [-Wunused-but-set-variable]
geom.c:64:12: warning: variable ‘nreal’ set but not used [-Wunused-but-set-variable]
source='geom_utils.c' object='acousto-geom_utils.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-geom_utils.o `test -f 'geom_utils.c' || echo './'`geom_utils.c
geom_utils.c: In function ‘build_geoms’:
geom_utils.c:42:25: warning: variable ‘gmshgeom’ set but not used [-Wunused-but-set-variable]
geom_utils.c:41:25: warning: variable ‘nodesgeom’ set but not used [-Wunused-but-set-variable]
geom_utils.c: In function ‘sphere’:
geom_utils.c:503:10: warning: variable ‘i2’ set but not used [-Wunused-but-set-variable]
geom_utils.c:496:13: warning: variable ‘invpi’ set but not used [-Wunused-but-set-variable]
geom_utils.c: In function ‘cylinder’:
geom_utils.c:576:10: warning: variable ‘i2’ set but not used [-Wunused-but-set-variable]
geom_utils.c:568:13: warning: variable ‘invpi’ set but not used [-Wunused-but-set-variable]
geom_utils.c: In function ‘plate’:
geom_utils.c:647:10: warning: variable ‘i2’ set but not used [-Wunused-but-set-variable]
geom_utils.c: In function ‘read_arrays’:
geom_utils.c:379:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:393:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:396:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:410:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:413:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:421:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:424:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:468:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c: In function ‘build_gmsh’:
geom_utils.c:186:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:193:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:209:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:216:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:250:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:253:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c: In function ‘build_nodes’:
geom_utils.c:90:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
geom_utils.c:101:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
source='logger.c' object='acousto-logger.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-logger.o `test -f 'logger.c' || echo './'`logger.c
source='ac_coef_body.c' object='acousto-ac_coef_body.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-ac_coef_body.o `test -f 'ac_coef_body.c' || echo './'`ac_coef_body.c
ac_coef_body.c: In function ‘acoustic_body_coefs’:
ac_coef_body.c:80:36: warning: variable ‘nio’ set but not used [-Wunused-but-set-variable]
ac_coef_body.c:55:8: warning: variable ‘mpi_nelmb’ set but not used [-Wunused-but-set-variable]
ac_coef_body.c:52:14: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
ac_coef_body.c:52:8: warning: variable ‘npsib’ set but not used [-Wunused-but-set-variable]
source='ac_coef_mics.c' object='acousto-ac_coef_mics.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-ac_coef_mics.o `test -f 'ac_coef_mics.c' || echo './'`ac_coef_mics.c
ac_coef_mics.c: In function ‘acoustic_mics_coefs’:
ac_coef_mics.c:81:12: warning: variable ‘ctmp’ set but not used [-Wunused-but-set-variable]
ac_coef_mics.c:78:36: warning: variable ‘nio’ set but not used [-Wunused-but-set-variable]
ac_coef_mics.c:54:8: warning: variable ‘mpi_nelmb’ set but not used [-Wunused-but-set-variable]
ac_coef_mics.c:51:14: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
ac_coef_mics.c:51:8: warning: variable ‘npsib’ set but not used [-Wunused-but-set-variable]
source='solution.c' object='acousto-solution.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-solution.o `test -f 'solution.c' || echo './'`solution.c
solution.c: In function ‘acoustic_solution’:
solution.c:78:14: warning: variable ‘ncntrc’ set but not used [-Wunused-but-set-variable]
solution.c:78:8: warning: variable ‘nelmb’ set but not used [-Wunused-but-set-variable]
solution.c:73:18: warning: variable ‘hfreq’ set but not used [-Wunused-but-set-variable]
solution.c:70:14: warning: variable ‘npsiu’ set but not used [-Wunused-but-set-variable]
solution.c:69:8: warning: variable ‘nfreq’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘read_acoustic_files’:
solution.c:353:7: warning: variable ‘nphiu’ set but not used [-Wunused-but-set-variable]
solution.c:352:7: warning: variable ‘mpi_ncntr’ set but not used [-Wunused-but-set-variable]
solution.c:350:7: warning: variable ‘nfreq’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘read_boundary_conditions’:
solution.c:467:7: warning: variable ‘nfreq’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘printsol_on_master’:
solution.c:708:16: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
solution.c:702:13: warning: variable ‘is’ set but not used [-Wunused-but-set-variable]
solution.c:702:10: warning: variable ‘rs’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘fr_print_pre_mic’:
solution.c:800:11: warning: variable ‘rho_s’ set but not used [-Wunused-but-set-variable]
solution.c:794:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
solution.c:792:7: warning: variable ‘locRows’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘condition_number’:
solution.c:857:16: warning: variable ‘locCols’ set but not used [-Wunused-but-set-variable]
solution.c: In function ‘read_solution’:
solution.c:916:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:919:13: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
solution.c: In function ‘read_boundary_conditions’:
solution.c:602:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:613:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:624:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:635:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:650:13: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:669:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c: In function ‘read_acoustic_files’:
solution.c:392:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:405:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c:418:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
solution.c: In function ‘acoustic_solution’:
solution.c:311:19: warning: ‘f’ may be used uninitialized in this function [-Wuninitialized]
source='linsys.c' object='acousto-linsys.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-linsys.o `test -f 'linsys.c' || echo './'`linsys.c
linsys.c: In function ‘solve_linear_system’:
linsys.c:66:7: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
linsys.c:62:7: warning: variable ‘itemp’ set but not used [-Wunused-but-set-variable]
linsys.c:58:15: warning: variable ‘locCols’ set but not used [-Wunused-but-set-variable]
source='ac_gmres.c' object='acousto-ac_gmres.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-ac_gmres.o `test -f 'ac_gmres.c' || echo './'`ac_gmres.c
ac_gmres.c: In function ‘gmres’:
ac_gmres.c:103:22: warning: variable ‘d’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:103:19: warning: variable ‘mi’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:103:14: warning: variable ‘mmin’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:103:9: warning: variable ‘mmax’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:102:29: warning: variable ‘normr’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:102:22: warning: variable ‘min_cr’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:102:15: warning: variable ‘max_cr’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:102:12: warning: variable ‘cr’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:99:9: warning: variable ‘nconv’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:82:14: warning: variable ‘itemp’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:55:18: warning: variable ‘mm’ set but not used [-Wunused-but-set-variable]
ac_gmres.c:106:11: warning: ‘f’ may be used uninitialized in this function [-Wuninitialized]
source='math.c' object='acousto-math.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-math.o `test -f 'math.c' || echo './'`math.c
source='integrals.c' object='acousto-integrals.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-integrals.o `test -f 'integrals.c' || echo './'`integrals.c
integrals.c: In function ‘intgba’:
integrals.c:80:12: warning: variable ‘cplt’ set but not used [-Wunused-but-set-variable]
integrals.c:70:11: warning: variable ‘unac’ set but not used [-Wunused-but-set-variable]
source='nrwash.c' object='acousto-nrwash.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-nrwash.o `test -f 'nrwash.c' || echo './'`nrwash.c
nrwash.c: In function ‘eval_phinc’:
nrwash.c:68:16: warning: variable ‘one’ set but not used [-Wunused-but-set-variable]
nrwash.c:68:11: warning: variable ‘zero’ set but not used [-Wunused-but-set-variable]
nrwash.c:59:7: warning: variable ‘npsiu’ set but not used [-Wunused-but-set-variable]
source='matrices.c' object='acousto-matrices.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-matrices.o `test -f 'matrices.c' || echo './'`matrices.c
matrices.c: In function ‘matyfd’:
matrices.c:98:8: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable]
matrices.c:80:36: warning: variable ‘nio’ set but not used [-Wunused-but-set-variable]
matrices.c:57:8: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
matrices.c:48:15: warning: variable ‘bstride’ set but not used [-Wunused-but-set-variable]
matrices.c:42:7: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
matrices.c: In function ‘matyfdc’:
matrices.c:379:8: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
matrices.c:331:7: warning: variable ‘cstride’ set but not used [-Wunused-but-set-variable]
matrices.c:325:7: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
source='matutils.c' object='acousto-matutils.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-matutils.o `test -f 'matutils.c' || echo './'`matutils.c
source='pre_mic.c' object='acousto-pre_mic.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-pre_mic.o `test -f 'pre_mic.c' || echo './'`pre_mic.c
pre_mic.c: In function ‘pre_mic’:
pre_mic.c:90:36: warning: variable ‘nio’ set but not used [-Wunused-but-set-variable]
pre_mic.c:83:11: warning: variable ‘ctmp’ set but not used [-Wunused-but-set-variable]
pre_mic.c:74:11: warning: variable ‘psiuval’ set but not used [-Wunused-but-set-variable]
pre_mic.c:63:11: warning: variable ‘rho_s’ set but not used [-Wunused-but-set-variable]
pre_mic.c:50:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
pre_mic.c:44:23: warning: variable ‘locCRows’ set but not used [-Wunused-but-set-variable]
pre_mic.c:42:7: warning: variable ‘bstride’ set but not used [-Wunused-but-set-variable]
pre_mic.c:41:7: warning: variable ‘mpi_ncntr’ set but not used [-Wunused-but-set-variable]
pre_mic.c:39:7: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
pre_mic.c: In function ‘pre_mic_coef’:
pre_mic.c:364:11: warning: variable ‘psiuval’ set but not used [-Wunused-but-set-variable]
pre_mic.c:353:11: warning: variable ‘rho_s’ set but not used [-Wunused-but-set-variable]
pre_mic.c:342:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
pre_mic.c:336:23: warning: variable ‘locCRows’ set but not used [-Wunused-but-set-variable]
pre_mic.c:334:7: warning: variable ‘mpi_ncntr’ set but not used [-Wunused-but-set-variable]
pre_mic.c:332:7: warning: variable ‘nphib’ set but not used [-Wunused-but-set-variable]
pre_mic.c: In function ‘print_premic_on_master’:
pre_mic.c:596:11: warning: variable ‘rho_s’ set but not used [-Wunused-but-set-variable]
pre_mic.c:590:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
pre_mic.c:588:7: warning: variable ‘locRows’ set but not used [-Wunused-but-set-variable]
source='vtkout.c' object='acousto-vtkout.o' libtool=no \
DEPDIR=.deps depmode=none /bin/bash ../aux_build/depcomp \
/usr/bin/mpicc -DPACKAGE_NAME=\"acousto\" -DPACKAGE_TARNAME=\"acousto\" -DPACKAGE_VERSION=\"1.6\" -DPACKAGE_STRING=\"acousto\ 1.6\" -DPACKAGE_BUGREPORT=\"u.iemma@uniroma3.it\" -DPACKAGE_URL=\"\" -DPACKAGE=\"acousto\" -DVERSION=\"1.6\" -I. -Wall -g -O2 -c -o acousto-vtkout.o `test -f 'vtkout.c' || echo './'`vtkout.c
vtkout.c: In function ‘vtkoutmu2’:
vtkout.c:66:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
vtkout.c:64:7: warning: variable ‘locRows’ set but not used [-Wunused-but-set-variable]
vtkout.c: In function ‘vtkoutmmesh’:
vtkout.c:230:23: warning: variable ‘cellvrtx’ set but not used [-Wunused-but-set-variable]
vtkout.c:225:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
vtkout.c:223:7: warning: variable ‘locRows’ set but not used [-Wunused-but-set-variable]
vtkout.c: In function ‘vtkoutb’:
vtkout.c:386:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
vtkout.c: In function ‘mshoutb’:
vtkout.c:542:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
vtkout.c: In function ‘mshoutm’:
vtkout.c:793:23: warning: variable ‘cellvrtx’ set but not used [-Wunused-but-set-variable]
vtkout.c:793:13: warning: variable ‘celltype’ set but not used [-Wunused-but-set-variable]
vtkout.c:788:10: warning: variable ‘nn’ set but not used [-Wunused-but-set-variable]
vtkout.c:786:7: warning: variable ‘locRows’ set but not used [-Wunused-but-set-variable]
/usr/bin/mpicc -Wall -g -O2 -L/aclib/nice -o acousto acousto-main.o acousto-geom.o acousto-geom_utils.o acousto-logger.o acousto-ac_coef_body.o acousto-ac_coef_mics.o acousto-solution.o acousto-linsys.o acousto-ac_gmres.o acousto-math.o acousto-integrals.o acousto-nrwash.o acousto-matrices.o acousto-matutils.o acousto-pre_mic.o acousto-vtkout.o -lscalapack -lblacsCinit-openmpi -lblacs-openmpi -lblacsCinit-openmpi -llapack -lblas -lgfortran -lm -lmpi_f77 -lconfig
make[1]: Leaving directory `/home/ubuntu/acousto_pi/src'
make[1]: Entering directory `/home/ubuntu/acousto_pi'
make[1]: Nothing to be done for `all-am'.
make[1]: Leaving directory `/home/ubuntu/acousto_pi'
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# make install
Making install in src
make[1]: Entering directory `/home/ubuntu/acousto_pi/src'
make[2]: Entering directory `/home/ubuntu/acousto_pi/src'
test -z "/usr/local/bin" || /bin/mkdir -p "/usr/local/bin"
/usr/bin/install -c acousto '/usr/local/bin'
make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/home/ubuntu/acousto_pi/src'
make[1]: Leaving directory `/home/ubuntu/acousto_pi/src'
make[1]: Entering directory `/home/ubuntu/acousto_pi'
make[2]: Entering directory `/home/ubuntu/acousto_pi'
make[2]: Nothing to be done for `install-exec-am'.
make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/home/ubuntu/acousto_pi'
make[1]: Leaving directory `/home/ubuntu/acousto_pi'
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# acousto
2014-01-24 02:19:42 INFO [1/1] **************** Job started ***************
2014-01-24 02:19:42 INFO [1/1] Program started
2014-01-24 02:19:42 ERROR [1/1] An input file must be specified with option -f <input file>
root@ip-172-31-40-91:/home/ubuntu/acousto_pi# cd doc/tutorials/Sphere_Monopole/
root@ip-172-31-40-91:/home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole# acousto -f
acousto.chief.mesh compare.gpl gmsh_geom_meshes/ sphere_source_gmsh.cfg
acousto.mics1.5.mesh .DS_Store pro-ch0-pc1-gmr-2014-01-17/
acousto.sources exact_solutions_at1.5/ sphere_source.cfg
root@ip-172-31-40-91:/home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole# acousto -f sphere_source.cfg
2014-01-24 02:20:13 INFO [1/1] **************** Job started ***************
2014-01-24 02:20:13 INFO [1/1] Program started
2014-01-24 02:20:13 INFO [1/1] Creating directory /home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole/pro-ch0-pc1-gmr-2014-01-24
2014-01-24 02:20:13 INFO [1/1] Output files will be stored in folder pro-ch0-pc1-gmr-2014-01-24
2014-01-24 02:20:13 INFO [1/1] under path /home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole
2014-01-24 02:20:13 INFO [1/1] Warning: Grid size was automatically determined as 1 x 1
2014-01-24 02:20:13 INFO [1/1] This choice is not optimal for large problems and a high number of processes.
2014-01-24 02:20:13 INFO [1/1] It may also lead to distribution inconsistencies.
2014-01-24 02:20:13 INFO [1/1] Mics file appears to be in AcouSTO native format
2014-01-24 02:20:13 INFO [1/1] Number of mics is read from config file
2014-01-24 02:20:13 INFO [1/1] n geometries=1
2014-01-24 02:20:13 INFO [1/1] GMRES Solver chosen
2014-01-24 02:20:13 INFO [1/1] Initializing process grid [1 x 1]
2014-01-24 02:20:13 INFO [1/1] Successfully initialized process grid [1 x 1]
2014-01-24 02:20:13 INFO [1/1] **************** Memory Estimate ***************
2014-01-24 02:20:13 INFO [1/1] Consider this as a rough estimate.
2014-01-24 02:20:13 INFO [1/1] Memory actually allocated heavily depends on
2014-01-24 02:20:13 INFO [1/1] the particular combination of parameters used
2014-01-24 02:20:13 INFO [1/1] Estimated Memory for Each Process: 53.551088 Mb
2014-01-24 02:20:13 INFO [1/1] **************** Memory Estimate-end ***********
2014-01-24 02:20:13 INFO [1/1] Starting Geometry Module
2014-01-24 02:20:14 INFO [1/1] Starting Coefficients Module
2014-01-24 02:20:14 INFO [1/1] Starting Body Coefficients Module
2014-01-24 02:20:14 INFO [1/1] Completed 10 %
2014-01-24 02:20:14 INFO [1/1] Completed 20 %
2014-01-24 02:20:14 INFO [1/1] Completed 30 %
2014-01-24 02:20:14 INFO [1/1] Completed 40 %
2014-01-24 02:20:14 INFO [1/1] Completed 50 %
2014-01-24 02:20:14 INFO [1/1] Completed 60 %
2014-01-24 02:20:14 INFO [1/1] Completed 70 %
2014-01-24 02:20:14 INFO [1/1] Completed 80 %
2014-01-24 02:20:14 INFO [1/1] Completed 90 %
2014-01-24 02:20:14 INFO [1/1] Completed 100 %
2014-01-24 02:20:14 INFO [1/1] Body Coefficients Module End
2014-01-24 02:20:14 INFO [1/1] Starting Mics Coefficients Module
2014-01-24 02:20:14 INFO [1/1] Completed 10 %
2014-01-24 02:20:14 INFO [1/1] Completed 20 %
2014-01-24 02:20:14 INFO [1/1] Completed 30 %
2014-01-24 02:20:14 INFO [1/1] Completed 40 %
2014-01-24 02:20:14 INFO [1/1] Completed 50 %
2014-01-24 02:20:14 INFO [1/1] Completed 60 %
2014-01-24 02:20:14 INFO [1/1] Completed 70 %
2014-01-24 02:20:14 INFO [1/1] Completed 80 %
2014-01-24 02:20:14 INFO [1/1] Completed 90 %
2014-01-24 02:20:14 INFO [1/1] Completed 100 %
2014-01-24 02:20:14 INFO [1/1] Mics Coefficients Module End
2014-01-24 02:20:14 INFO [1/1] Starting Solution Module
2014-01-24 02:20:14 INFO [1/1] ifreq = 0, s=(0.000000 +i 1077.566280), f=171.500000 Hz
2014-01-24 02:20:14 INFO [1/1] Boundary conditions: transferring 1176 bytes to nodes
2014-01-24 02:20:14 INFO [1/1] Starting GMRES iterations: maxit=1, restart=24
2014-01-24 02:20:14 INFO [1/1] GMRES: 24 iterations, residual:0.000000
2014-01-24 02:20:14 INFO [1/1] Broadcasting solution (24 complex values)
2014-01-24 02:20:14 INFO [1/1] Solution sent to all nodes
2014-01-24 02:20:14 INFO [1/1] total run time=0.337040 seconds
2014-01-24 02:20:14 INFO [1/1] ---------------------------------
2014-01-24 02:20:14 INFO [1/1] Run details
2014-01-24 02:20:14 INFO [1/1] ---------------------------------
2014-01-24 02:20:14 INFO [1/1] title = pro-ch0-pc1-gmr
2014-01-24 02:20:14 INFO [1/1] owner = umby
2014-01-24 02:20:14 INFO [1/1] cfg path = /home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole
2014-01-24 02:20:14 INFO [1/1] cfg = sphere_source.cfg
2014-01-24 02:20:14 INFO [1/1] start = Fri 2014-01-24 02:20:13 UTC
2014-01-24 02:20:14 INFO [1/1] end = Fri 2014-01-24 02:20:14 UTC
2014-01-24 02:20:14 INFO [1/1] elapsed = 0.337040 s
2014-01-24 02:20:14 INFO [1/1] for body coefs = 0.072131 s
2014-01-24 02:20:14 INFO [1/1] for mics coefs = 0.142132 s
2014-01-24 02:20:14 INFO [1/1] for solution = 0.079032 s
2014-01-24 02:20:14 INFO [1/1] no. of procs. = 1
2014-01-24 02:20:14 INFO [1/1] **************** Job finished ***************
2014-01-24 02:20:14 INFO [1/1] Total Allocated Memory: 3.013680 Mb
2014-01-24 02:20:14 INFO [1/1] cleanup...
2014-01-24 02:20:14 INFO [1/1] End
root@ip-172-31-40-91:/home/ubuntu/acousto_pi/doc/tutorials/Sphere_Monopole#